Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 CR769767.2-201ENST00000622735 460 ntBASIC13.88□□□□□ -0.19
FAM78BQ5VT40 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FAM78BQ5VT40 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 AC008687.5-201ENST00000593746 558 ntBASIC13.87□□□□□ -0.19
FAM78BQ5VT40 AP000525.1-201ENST00000608286 694 ntBASIC13.87□□□□□ -0.19
FAM78BQ5VT40 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 AC009949.1-201ENST00000623048 1830 ntBASIC13.87□□□□□ -0.19
FAM78BQ5VT40 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
FAM78BQ5VT40 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 REXO1L11P-201ENST00000620964 1927 ntBASIC13.86□□□□□ -0.19
FAM78BQ5VT40 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 AP003041.3-201ENST00000527151 707 ntBASIC13.86□□□□□ -0.19
FAM78BQ5VT40 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.86□□□□□ -0.19
FAM78BQ5VT40 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms