Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 HNRNPDP1-201ENST00000439535 754 ntBASIC15.37■□□□□ 0.05
NKX6-1P78426 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.37■□□□□ 0.05
NKX6-1P78426 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
NKX6-1P78426 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NKX6-1P78426 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.37■□□□□ 0.05
NKX6-1P78426 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 TNRC18P3-201ENST00000441896 2691 ntBASIC15.37■□□□□ 0.05
NKX6-1P78426 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.37■□□□□ 0.05
NKX6-1P78426 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX6-1P78426 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX6-1P78426 AC104109.2-201ENST00000602919 1418 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NKX6-1P78426 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NKX6-1P78426 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NKX6-1P78426 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX6-1P78426 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NKX6-1P78426 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
NKX6-1P78426 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX6-1P78426 UPF3AP3-201ENST00000420996 769 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 AC096633.1-201ENST00000422446 749 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 MED15P5-201ENST00000423150 992 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 AC098831.1-202ENST00000438821 336 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX6-1P78426 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX6-1P78426 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.36■□□□□ 0.05
NKX6-1P78426 AC011467.2-201ENST00000598425 242 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 FAM197Y3-203ENST00000618346 717 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 AC055717.3-201ENST00000622967 595 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 AC079781.4-201ENST00000641908 219 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX6-1P78426 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NKX6-1P78426 AL139384.1-201ENST00000612143 3047 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX6-1P78426 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NKX6-1P78426 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX6-1P78426 AC068880.1-201ENST00000507289 2297 ntBASIC15.36■□□□□ 0.05
NKX6-1P78426 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NKX6-1P78426 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX6-1P78426 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.35■□□□□ 0.05
NKX6-1P78426 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.35■□□□□ 0.05
NKX6-1P78426 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.35■□□□□ 0.05
NKX6-1P78426 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.35■□□□□ 0.05
NKX6-1P78426 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.35■□□□□ 0.05
NKX6-1P78426 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.35■□□□□ 0.05
NKX6-1P78426 HMGN1P19-201ENST00000436976 333 ntBASIC15.35■□□□□ 0.05
NKX6-1P78426 PGAM5P1-201ENST00000518923 814 ntBASIC15.35■□□□□ 0.05
NKX6-1P78426 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.35■□□□□ 0.05
NKX6-1P78426 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 AC145285.3-201ENST00000564603 959 ntBASIC15.35■□□□□ 0.05
NKX6-1P78426 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.35■□□□□ 0.05
NKX6-1P78426 MIR3687-2-201ENST00000577708 61 ntBASIC15.35■□□□□ 0.05
NKX6-1P78426 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.35■□□□□ 0.05
NKX6-1P78426 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX6-1P78426 AL356488.2-201ENST00000602755 427 ntBASIC15.35■□□□□ 0.05
NKX6-1P78426 MIR3687-1-201ENST00000614492 61 ntBASIC15.35■□□□□ 0.05
NKX6-1P78426 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.35■□□□□ 0.05
NKX6-1P78426 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.35■□□□□ 0.05
NKX6-1P78426 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX6-1P78426 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms