Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.98■□□□□ 0.47
NEK3P51956 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NEK3P51956 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.98■□□□□ 0.47
NEK3P51956 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NEK3P51956 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NEK3P51956 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.98■□□□□ 0.47
NEK3P51956 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NEK3P51956 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 AC022898.2-201ENST00000616822 1312 ntBASIC17.98■□□□□ 0.47
NEK3P51956 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.97■□□□□ 0.47
NEK3P51956 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.97■□□□□ 0.47
NEK3P51956 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NEK3P51956 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
NEK3P51956 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.97■□□□□ 0.47
NEK3P51956 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.97■□□□□ 0.47
NEK3P51956 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NEK3P51956 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
NEK3P51956 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NEK3P51956 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.97■□□□□ 0.47
NEK3P51956 AC079781.3-201ENST00000449110 356 ntBASIC17.97■□□□□ 0.47
NEK3P51956 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.97■□□□□ 0.47
NEK3P51956 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.97■□□□□ 0.47
NEK3P51956 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.97■□□□□ 0.47
NEK3P51956 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.97■□□□□ 0.47
NEK3P51956 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.97■□□□□ 0.47
NEK3P51956 AC011467.2-201ENST00000598425 242 ntBASIC17.97■□□□□ 0.47
NEK3P51956 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.97■□□□□ 0.47
NEK3P51956 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NEK3P51956 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEK3P51956 KRT8P10-201ENST00000450021 1447 ntBASIC17.97■□□□□ 0.47
NEK3P51956 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NEK3P51956 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.96■□□□□ 0.47
NEK3P51956 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NEK3P51956 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.96■□□□□ 0.47
NEK3P51956 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.96■□□□□ 0.47
NEK3P51956 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.96■□□□□ 0.47
NEK3P51956 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NEK3P51956 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
NEK3P51956 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 AL160237.2-201ENST00000556165 472 ntBASIC17.96■□□□□ 0.47
NEK3P51956 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.96■□□□□ 0.47
NEK3P51956 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.96■□□□□ 0.47
NEK3P51956 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.96■□□□□ 0.47
NEK3P51956 AL121912.1-201ENST00000603683 238 ntBASIC17.96■□□□□ 0.47
NEK3P51956 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.96■□□□□ 0.47
NEK3P51956 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
NEK3P51956 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
NEK3P51956 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.96■□□□□ 0.47
NEK3P51956 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
NEK3P51956 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NEK3P51956 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEK3P51956 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NEK3P51956 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
NEK3P51956 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NEK3P51956 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
NEK3P51956 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NEK3P51956 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.95■□□□□ 0.46
NEK3P51956 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEK3P51956 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEK3P51956 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEK3P51956 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.95■□□□□ 0.46
NEK3P51956 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NEK3P51956 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEK3P51956 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEK3P51956 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEK3P51956 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms