Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CDK7P50613 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDK7P50613 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CDK7P50613 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.15■□□□□ 0.66
CDK7P50613 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDK7P50613 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 AL627223.1-201ENST00000416693 442 ntBASIC19.15■□□□□ 0.66
CDK7P50613 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.15■□□□□ 0.66
CDK7P50613 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.15■□□□□ 0.66
CDK7P50613 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.15■□□□□ 0.66
CDK7P50613 AC009093.7-201ENST00000623853 1223 ntBASIC19.15■□□□□ 0.66
CDK7P50613 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.15■□□□□ 0.66
CDK7P50613 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.15■□□□□ 0.66
CDK7P50613 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK7P50613 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK7P50613 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CDK7P50613 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CDK7P50613 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDK7P50613 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDK7P50613 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.14■□□□□ 0.65
CDK7P50613 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CDK7P50613 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CDK7P50613 FAM86GP-201ENST00000448322 971 ntBASIC19.14■□□□□ 0.65
CDK7P50613 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.14■□□□□ 0.65
CDK7P50613 AL513480.1-201ENST00000451731 511 ntBASIC19.14■□□□□ 0.65
CDK7P50613 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.14■□□□□ 0.65
CDK7P50613 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.14■□□□□ 0.65
CDK7P50613 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.14■□□□□ 0.65
CDK7P50613 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 AJ011932.1-201ENST00000621707 465 ntBASIC19.14■□□□□ 0.65
CDK7P50613 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CDK7P50613 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDK7P50613 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDK7P50613 AC093677.2-201ENST00000600169 1863 ntBASIC19.14■□□□□ 0.65
CDK7P50613 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK7P50613 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CDK7P50613 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDK7P50613 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK7P50613 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CDK7P50613 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK7P50613 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CDK7P50613 RNA5SP421-201ENST00000516864 134 ntBASIC19.13■□□□□ 0.65
CDK7P50613 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.13■□□□□ 0.65
CDK7P50613 DUX4L27-201ENST00000554796 1261 ntBASIC19.13■□□□□ 0.65
CDK7P50613 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.13■□□□□ 0.65
CDK7P50613 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.13■□□□□ 0.65
CDK7P50613 AC026120.1-201ENST00000611536 926 ntBASIC19.13■□□□□ 0.65
CDK7P50613 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK7P50613 Z92544.3-201ENST00000624747 417 ntBASIC19.13■□□□□ 0.65
CDK7P50613 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.13■□□□□ 0.65
CDK7P50613 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDK7P50613 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDK7P50613 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CDK7P50613 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.13■□□□□ 0.65
CDK7P50613 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDK7P50613 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
CDK7P50613 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CDK7P50613 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK7P50613 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDK7P50613 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms