Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.17■□□□□ 0.5
MTHFRP42898 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
MTHFRP42898 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.17■□□□□ 0.5
MTHFRP42898 AC022145.2-201ENST00000598203 171 ntBASIC18.17■□□□□ 0.5
MTHFRP42898 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.17■□□□□ 0.5
MTHFRP42898 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.17■□□□□ 0.5
MTHFRP42898 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 PI4KAP1-204ENST00000612579 1703 ntBASIC18.17■□□□□ 0.5
MTHFRP42898 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MTHFRP42898 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
MTHFRP42898 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.16■□□□□ 0.5
MTHFRP42898 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.16■□□□□ 0.5
MTHFRP42898 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
MTHFRP42898 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.16■□□□□ 0.5
MTHFRP42898 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MTHFRP42898 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.16■□□□□ 0.5
MTHFRP42898 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.16■□□□□ 0.5
MTHFRP42898 FAM86GP-201ENST00000448322 971 ntBASIC18.16■□□□□ 0.5
MTHFRP42898 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.16■□□□□ 0.5
MTHFRP42898 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.16■□□□□ 0.5
MTHFRP42898 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.16■□□□□ 0.5
MTHFRP42898 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MTHFRP42898 LINC00628-201ENST00000628516 1289 ntBASIC18.16■□□□□ 0.5
MTHFRP42898 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MTHFRP42898 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.16■□□□□ 0.5
MTHFRP42898 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.16■□□□□ 0.5
MTHFRP42898 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.16■□□□□ 0.5
MTHFRP42898 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MTHFRP42898 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.15■□□□□ 0.5
MTHFRP42898 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MTHFRP42898 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
MTHFRP42898 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.15■□□□□ 0.5
MTHFRP42898 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.15■□□□□ 0.5
MTHFRP42898 AC112191.1-201ENST00000523689 701 ntBASIC18.15■□□□□ 0.5
MTHFRP42898 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.15■□□□□ 0.5
MTHFRP42898 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.15■□□□□ 0.5
MTHFRP42898 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MTHFRP42898 AC090340.1-201ENST00000620778 4980 ntBASIC18.15■□□□□ 0.5
MTHFRP42898 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MTHFRP42898 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MTHFRP42898 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MTHFRP42898 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.15■□□□□ 0.5
MTHFRP42898 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MTHFRP42898 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
MTHFRP42898 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.14■□□□□ 0.5
MTHFRP42898 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MTHFRP42898 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MTHFRP42898 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.5
MTHFRP42898 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MTHFRP42898 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MTHFRP42898 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.14■□□□□ 0.49
MTHFRP42898 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MTHFRP42898 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MTHFRP42898 WIZP1-201ENST00000531444 2299 ntBASIC18.14■□□□□ 0.49
MTHFRP42898 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms