Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
HMGCLP35914 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HMGCLP35914 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGCLP35914 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCLP35914 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCLP35914 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMGCLP35914 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 TPM4P1-201ENST00000436100 807 ntBASIC17.31■□□□□ 0.36
HMGCLP35914 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCLP35914 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCLP35914 AC021087.4-201ENST00000563761 564 ntBASIC17.31■□□□□ 0.36
HMGCLP35914 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCLP35914 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HMGCLP35914 AL589182.2-201ENST00000619332 1049 ntBASIC17.31■□□□□ 0.36
HMGCLP35914 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMGCLP35914 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMGCLP35914 FZD10-202ENST00000539839 3282 ntBASIC17.31■□□□□ 0.36
HMGCLP35914 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGCLP35914 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMGCLP35914 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCLP35914 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCLP35914 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HMGCLP35914 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 NCF1C-201ENST00000438382 1427 ntBASIC17.3■□□□□ 0.36
HMGCLP35914 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
HMGCLP35914 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCLP35914 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCLP35914 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
HMGCLP35914 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCLP35914 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCLP35914 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.3■□□□□ 0.36
HMGCLP35914 SLC25A1P3-201ENST00000395415 828 ntBASIC17.3■□□□□ 0.36
HMGCLP35914 AC079781.3-201ENST00000449110 356 ntBASIC17.3■□□□□ 0.36
HMGCLP35914 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCLP35914 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCLP35914 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMGCLP35914 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.3■□□□□ 0.36
HMGCLP35914 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCLP35914 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCLP35914 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMGCLP35914 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCLP35914 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HMGCLP35914 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HMGCLP35914 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMGCLP35914 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCLP35914 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HMGCLP35914 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HMGCLP35914 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HMGCLP35914 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HMGCLP35914 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 LINC00982-205ENST00000420957 435 ntBASIC17.29■□□□□ 0.36
HMGCLP35914 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCLP35914 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLP35914 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.29■□□□□ 0.36
HMGCLP35914 AC104692.2-201ENST00000603054 253 ntBASIC17.29■□□□□ 0.36
HMGCLP35914 AC025062.2-201ENST00000605477 670 ntBASIC17.29■□□□□ 0.36
HMGCLP35914 AL031008.1-201ENST00000619963 541 ntBASIC17.29■□□□□ 0.36
HMGCLP35914 TP73-AS1-207ENST00000624167 988 ntBASIC17.29■□□□□ 0.36
HMGCLP35914 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms