Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A5P29400 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A5P29400 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A5P29400 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.66■□□□□ 0.9
COL4A5P29400 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.66■□□□□ 0.9
COL4A5P29400 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.66■□□□□ 0.9
COL4A5P29400 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.66■□□□□ 0.9
COL4A5P29400 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
COL4A5P29400 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A5P29400 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A5P29400 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.65■□□□□ 0.9
COL4A5P29400 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COL4A5P29400 SPDYE12P-201ENST00000618416 771 ntBASIC20.65■□□□□ 0.9
COL4A5P29400 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 WASH6P-202ENST00000359512 1437 ntBASIC20.65■□□□□ 0.9
COL4A5P29400 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL4A5P29400 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A5P29400 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL4A5P29400 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL4A5P29400 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL4A5P29400 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.64■□□□□ 0.9
COL4A5P29400 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.64■□□□□ 0.9
COL4A5P29400 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.64■□□□□ 0.9
COL4A5P29400 IGHV3-62-201ENST00000520057 340 ntBASIC20.64■□□□□ 0.9
COL4A5P29400 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.64■□□□□ 0.9
COL4A5P29400 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.64■□□□□ 0.9
COL4A5P29400 AC005412.3-201ENST00000580309 715 ntBASIC20.64■□□□□ 0.9
COL4A5P29400 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL4A5P29400 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.64■□□□□ 0.9
COL4A5P29400 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
COL4A5P29400 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.64■□□□□ 0.9
COL4A5P29400 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.64■□□□□ 0.9
COL4A5P29400 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL4A5P29400 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
COL4A5P29400 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.64■□□□□ 0.89
COL4A5P29400 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.64■□□□□ 0.89
COL4A5P29400 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.64■□□□□ 0.89
COL4A5P29400 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.64■□□□□ 0.89
COL4A5P29400 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.64■□□□□ 0.89
COL4A5P29400 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.64■□□□□ 0.89
COL4A5P29400 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.64■□□□□ 0.89
COL4A5P29400 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.64■□□□□ 0.89
COL4A5P29400 MIR4453-201ENST00000584019 89 ntBASIC20.64■□□□□ 0.89
COL4A5P29400 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A5P29400 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
COL4A5P29400 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
COL4A5P29400 SLC22A20-204ENST00000530038 1673 ntBASIC20.63■□□□□ 0.89
COL4A5P29400 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.63■□□□□ 0.89
COL4A5P29400 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COL4A5P29400 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 AC241585.1-201ENST00000433527 519 ntBASIC20.63■□□□□ 0.89
COL4A5P29400 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.63■□□□□ 0.89
COL4A5P29400 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A5P29400 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.63■□□□□ 0.89
COL4A5P29400 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A5P29400 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A5P29400 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COL4A5P29400 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A5P29400 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A5P29400 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A5P29400 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A5P29400 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A5P29400 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A5P29400 RNU1-129P-201ENST00000384064 167 ntBASIC20.62■□□□□ 0.89
COL4A5P29400 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.62■□□□□ 0.89
COL4A5P29400 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.62■□□□□ 0.89
COL4A5P29400 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.62■□□□□ 0.89
COL4A5P29400 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.62■□□□□ 0.89
COL4A5P29400 U1.21-201ENST00000580816 167 ntBASIC20.62■□□□□ 0.89
COL4A5P29400 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms