Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
GDF1P27539 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.8■□□□□ 0.12
GDF1P27539 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 ZNF259P1-201ENST00000407656 1365 ntBASIC15.8■□□□□ 0.12
GDF1P27539 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GDF1P27539 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.8■□□□□ 0.12
GDF1P27539 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.8■□□□□ 0.12
GDF1P27539 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.8■□□□□ 0.12
GDF1P27539 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.8■□□□□ 0.12
GDF1P27539 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.8■□□□□ 0.12
GDF1P27539 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.8■□□□□ 0.12
GDF1P27539 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
GDF1P27539 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GDF1P27539 AC005593.1-201ENST00000624894 515 ntBASIC15.8■□□□□ 0.12
GDF1P27539 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.8■□□□□ 0.12
GDF1P27539 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.8■□□□□ 0.12
GDF1P27539 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GDF1P27539 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GDF1P27539 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.79■□□□□ 0.12
GDF1P27539 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.79■□□□□ 0.12
GDF1P27539 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.79■□□□□ 0.12
GDF1P27539 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 AC136632.2-201ENST00000512891 861 ntBASIC15.79■□□□□ 0.12
GDF1P27539 IGHV3-22-201ENST00000520721 359 ntBASIC15.79■□□□□ 0.12
GDF1P27539 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GDF1P27539 AC117500.6-201ENST00000624871 588 ntBASIC15.79■□□□□ 0.12
GDF1P27539 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 AC046185.3-201ENST00000623228 1824 ntBASIC15.79■□□□□ 0.12
GDF1P27539 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.79■□□□□ 0.12
GDF1P27539 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 NOC2LP1-202ENST00000452600 2235 ntBASIC15.79■□□□□ 0.12
GDF1P27539 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDF1P27539 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.79■□□□□ 0.12
GDF1P27539 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
GDF1P27539 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
GDF1P27539 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GDF1P27539 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.78■□□□□ 0.12
GDF1P27539 AC104109.2-201ENST00000602919 1418 ntBASIC15.78■□□□□ 0.12
GDF1P27539 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GDF1P27539 LINC00304-203ENST00000565008 1864 ntBASIC15.78■□□□□ 0.12
GDF1P27539 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GDF1P27539 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GDF1P27539 AL355312.1-201ENST00000407115 2176 ntBASIC15.78■□□□□ 0.12
GDF1P27539 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
GDF1P27539 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.78■□□□□ 0.12
GDF1P27539 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
GDF1P27539 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GDF1P27539 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GDF1P27539 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GDF1P27539 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
GDF1P27539 PMS2P1-201ENST00000431037 1228 ntBASIC15.78■□□□□ 0.12
GDF1P27539 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.78■□□□□ 0.12
GDF1P27539 RNA5SP415-201ENST00000517246 115 ntBASIC15.78■□□□□ 0.12
GDF1P27539 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GDF1P27539 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.78■□□□□ 0.12
GDF1P27539 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.78■□□□□ 0.12
GDF1P27539 AC106730.1-201ENST00000566722 1090 ntBASIC15.78■□□□□ 0.12
GDF1P27539 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms