Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NCLP19338 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.77■□□□□ 0.91
NCLP19338 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
NCLP19338 PCDHB19P-201ENST00000570871 2371 ntBASIC20.77■□□□□ 0.91
NCLP19338 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
NCLP19338 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NCLP19338 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NCLP19338 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
NCLP19338 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.76■□□□□ 0.91
NCLP19338 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.76■□□□□ 0.91
NCLP19338 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NCLP19338 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NCLP19338 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.76■□□□□ 0.91
NCLP19338 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.76■□□□□ 0.91
NCLP19338 MIR3180-4-201ENST00000582223 153 ntBASIC20.76■□□□□ 0.91
NCLP19338 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NCLP19338 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NCLP19338 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.76■□□□□ 0.91
NCLP19338 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.76■□□□□ 0.91
NCLP19338 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCLP19338 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.75■□□□□ 0.91
NCLP19338 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC20.75■□□□□ 0.91
NCLP19338 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.75■□□□□ 0.91
NCLP19338 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.75■□□□□ 0.91
NCLP19338 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.75■□□□□ 0.91
NCLP19338 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.75■□□□□ 0.91
NCLP19338 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NCLP19338 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.75■□□□□ 0.91
NCLP19338 COX11P1-201ENST00000489116 835 ntBASIC20.75■□□□□ 0.91
NCLP19338 AC063952.2-201ENST00000498792 1227 ntBASIC20.75■□□□□ 0.91
NCLP19338 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.75■□□□□ 0.91
NCLP19338 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.75■□□□□ 0.91
NCLP19338 AC139887.4-201ENST00000607877 719 ntBASIC20.75■□□□□ 0.91
NCLP19338 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.75■□□□□ 0.91
NCLP19338 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NCLP19338 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NCLP19338 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 PCDHA14-201ENST00000506751 2298 ntBASIC20.75■□□□□ 0.91
NCLP19338 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
NCLP19338 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.75■□□□□ 0.91
NCLP19338 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NCLP19338 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCLP19338 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.74■□□□□ 0.91
NCLP19338 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
NCLP19338 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NCLP19338 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.74■□□□□ 0.91
NCLP19338 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.74■□□□□ 0.91
NCLP19338 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.74■□□□□ 0.91
NCLP19338 AC022616.7-201ENST00000525383 220 ntBASIC20.74■□□□□ 0.91
NCLP19338 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.74■□□□□ 0.91
NCLP19338 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.74■□□□□ 0.91
NCLP19338 AC024243.1-201ENST00000609234 778 ntBASIC20.74■□□□□ 0.91
NCLP19338 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.74■□□□□ 0.91
NCLP19338 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.74■□□□□ 0.91
NCLP19338 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NCLP19338 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.74■□□□□ 0.91
NCLP19338 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms