Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CHGBP05060 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHGBP05060 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHGBP05060 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHGBP05060 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHGBP05060 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.89■□□□□ 0.93
CHGBP05060 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHGBP05060 LETM1P2-201ENST00000597330 2178 ntBASIC20.89■□□□□ 0.93
CHGBP05060 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CHGBP05060 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.88■□□□□ 0.93
CHGBP05060 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.88■□□□□ 0.93
CHGBP05060 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.88■□□□□ 0.93
CHGBP05060 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.88■□□□□ 0.93
CHGBP05060 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 AL590627.1-203ENST00000421194 1026 ntBASIC20.88■□□□□ 0.93
CHGBP05060 LAGE3P1-201ENST00000425356 484 ntBASIC20.88■□□□□ 0.93
CHGBP05060 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.88■□□□□ 0.93
CHGBP05060 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.88■□□□□ 0.93
CHGBP05060 IGHV3-22-201ENST00000520721 359 ntBASIC20.88■□□□□ 0.93
CHGBP05060 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.88■□□□□ 0.93
CHGBP05060 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.88■□□□□ 0.93
CHGBP05060 AC139887.3-201ENST00000568585 713 ntBASIC20.88■□□□□ 0.93
CHGBP05060 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.88■□□□□ 0.93
CHGBP05060 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.88■□□□□ 0.93
CHGBP05060 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.88■□□□□ 0.93
CHGBP05060 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHGBP05060 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHGBP05060 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHGBP05060 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CHGBP05060 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
CHGBP05060 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHGBP05060 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.87■□□□□ 0.93
CHGBP05060 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHGBP05060 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.87■□□□□ 0.93
CHGBP05060 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.87■□□□□ 0.93
CHGBP05060 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CHGBP05060 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHGBP05060 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CHGBP05060 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHGBP05060 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.87■□□□□ 0.93
CHGBP05060 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHGBP05060 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.87■□□□□ 0.93
CHGBP05060 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.87■□□□□ 0.93
CHGBP05060 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.87■□□□□ 0.93
CHGBP05060 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.87■□□□□ 0.93
CHGBP05060 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHGBP05060 AC120114.3-201ENST00000611923 658 ntBASIC20.87■□□□□ 0.93
CHGBP05060 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHGBP05060 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CHGBP05060 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHGBP05060 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHGBP05060 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHGBP05060 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.87■□□□□ 0.93
CHGBP05060 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.86■□□□□ 0.93
CHGBP05060 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHGBP05060 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.86■□□□□ 0.93
CHGBP05060 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.86■□□□□ 0.93
CHGBP05060 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.86■□□□□ 0.93
CHGBP05060 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.86■□□□□ 0.93
CHGBP05060 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.86■□□□□ 0.93
CHGBP05060 AL589182.2-201ENST00000619332 1049 ntBASIC20.86■□□□□ 0.93
CHGBP05060 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.86■□□□□ 0.93
CHGBP05060 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.86■□□□□ 0.93
CHGBP05060 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.86■□□□□ 0.93
CHGBP05060 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.86■□□□□ 0.93
CHGBP05060 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHGBP05060 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHGBP05060 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHGBP05060 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHGBP05060 AL590787.1-201ENST00000568856 1315 ntBASIC20.85■□□□□ 0.93
CHGBP05060 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHGBP05060 AC092053.1-201ENST00000605787 1936 ntBASIC20.85■□□□□ 0.93
CHGBP05060 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHGBP05060 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHGBP05060 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHGBP05060 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHGBP05060 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.85■□□□□ 0.93
CHGBP05060 AC105339.3-201ENST00000560043 636 ntBASIC20.85■□□□□ 0.93
CHGBP05060 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHGBP05060 AL139424.1-201ENST00000607572 797 ntBASIC20.85■□□□□ 0.93
CHGBP05060 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.85■□□□□ 0.93
CHGBP05060 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms