Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 VENTXP5-201ENST00000523979 775 ntBASIC15.68■□□□□ 0.1
HLA-DQA2P01906 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.68■□□□□ 0.1
HLA-DQA2P01906 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQA2P01906 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 AC068472.1-201ENST00000474589 881 ntBASIC15.67■□□□□ 0.1
HLA-DQA2P01906 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 AC006011.2-201ENST00000621313 1158 ntBASIC15.67■□□□□ 0.1
HLA-DQA2P01906 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 Z83836.1-201ENST00000624605 1642 ntBASIC15.67■□□□□ 0.1
HLA-DQA2P01906 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQA2P01906 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQA2P01906 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms