Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.03■□□□□ 0.32
SIX3O95343 AL031133.1-201ENST00000406807 723 ntBASIC17.03■□□□□ 0.32
SIX3O95343 KRT18P21-201ENST00000515767 1272 ntBASIC17.03■□□□□ 0.32
SIX3O95343 IGHV3-52-201ENST00000519770 353 ntBASIC17.03■□□□□ 0.32
SIX3O95343 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.03■□□□□ 0.32
SIX3O95343 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX3O95343 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SIX3O95343 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX3O95343 AC011840.4-201ENST00000578471 627 ntBASIC17.03■□□□□ 0.32
SIX3O95343 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.03■□□□□ 0.32
SIX3O95343 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX3O95343 LINC02012-201ENST00000608206 1725 ntBASIC17.03■□□□□ 0.32
SIX3O95343 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.03■□□□□ 0.32
SIX3O95343 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX3O95343 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.02■□□□□ 0.32
SIX3O95343 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 UBALD1-205ENST00000590891 2641 ntBASIC17.02■□□□□ 0.32
SIX3O95343 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SIX3O95343 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.02■□□□□ 0.32
SIX3O95343 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.02■□□□□ 0.32
SIX3O95343 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.02■□□□□ 0.32
SIX3O95343 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SIX3O95343 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SIX3O95343 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SIX3O95343 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SIX3O95343 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.02■□□□□ 0.32
SIX3O95343 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.02■□□□□ 0.32
SIX3O95343 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.02■□□□□ 0.32
SIX3O95343 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
SIX3O95343 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.02■□□□□ 0.32
SIX3O95343 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
SIX3O95343 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX3O95343 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SIX3O95343 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX3O95343 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX3O95343 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX3O95343 KRT8P10-201ENST00000450021 1447 ntBASIC17.02■□□□□ 0.31
SIX3O95343 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX3O95343 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.02■□□□□ 0.31
SIX3O95343 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.02■□□□□ 0.31
SIX3O95343 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX3O95343 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX3O95343 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SIX3O95343 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
SIX3O95343 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX3O95343 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX3O95343 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
SIX3O95343 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX3O95343 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX3O95343 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.01■□□□□ 0.31
SIX3O95343 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX3O95343 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX3O95343 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SIX3O95343 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SIX3O95343 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 MYCLP1-201ENST00000372451 1075 ntBASIC17.01■□□□□ 0.31
SIX3O95343 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.01■□□□□ 0.31
SIX3O95343 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX3O95343 AC122714.2-201ENST00000502787 707 ntBASIC17.01■□□□□ 0.31
SIX3O95343 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX3O95343 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX3O95343 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX3O95343 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX3O95343 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX3O95343 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX3O95343 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX3O95343 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SIX3O95343 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms