Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.65■□□□□ 0.26
LCMT2O60294 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LCMT2O60294 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.65■□□□□ 0.26
LCMT2O60294 AC016396.2-201ENST00000562575 1417 ntBASIC16.65■□□□□ 0.26
LCMT2O60294 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 PRYP5-201ENST00000451909 266 ntBASIC16.65■□□□□ 0.26
LCMT2O60294 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LCMT2O60294 SIGLEC30P-201ENST00000455569 941 ntBASIC16.65■□□□□ 0.26
LCMT2O60294 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.65■□□□□ 0.26
LCMT2O60294 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.65■□□□□ 0.26
LCMT2O60294 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.65■□□□□ 0.26
LCMT2O60294 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.65■□□□□ 0.26
LCMT2O60294 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.65■□□□□ 0.26
LCMT2O60294 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.65■□□□□ 0.26
LCMT2O60294 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.65■□□□□ 0.26
LCMT2O60294 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LCMT2O60294 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LCMT2O60294 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.65■□□□□ 0.26
LCMT2O60294 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.65■□□□□ 0.26
LCMT2O60294 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LCMT2O60294 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
LCMT2O60294 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LCMT2O60294 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LCMT2O60294 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LCMT2O60294 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
LCMT2O60294 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LCMT2O60294 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LCMT2O60294 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LCMT2O60294 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.64■□□□□ 0.25
LCMT2O60294 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LCMT2O60294 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 AC004870.1-201ENST00000315132 882 ntBASIC16.64■□□□□ 0.25
LCMT2O60294 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.64■□□□□ 0.25
LCMT2O60294 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.64■□□□□ 0.25
LCMT2O60294 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LCMT2O60294 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LCMT2O60294 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.64■□□□□ 0.25
LCMT2O60294 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.64■□□□□ 0.25
LCMT2O60294 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.64■□□□□ 0.25
LCMT2O60294 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.64■□□□□ 0.25
LCMT2O60294 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
LCMT2O60294 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 AL121912.1-201ENST00000603683 238 ntBASIC16.64■□□□□ 0.25
LCMT2O60294 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.64■□□□□ 0.25
LCMT2O60294 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LCMT2O60294 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.64■□□□□ 0.25
LCMT2O60294 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LCMT2O60294 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCMT2O60294 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.64■□□□□ 0.25
LCMT2O60294 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.63■□□□□ 0.25
LCMT2O60294 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LCMT2O60294 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
LCMT2O60294 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LCMT2O60294 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LCMT2O60294 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LCMT2O60294 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.63■□□□□ 0.25
LCMT2O60294 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LCMT2O60294 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.63■□□□□ 0.25
LCMT2O60294 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 AC021087.4-201ENST00000563761 564 ntBASIC16.63■□□□□ 0.25
LCMT2O60294 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.63■□□□□ 0.25
LCMT2O60294 AC104692.2-201ENST00000603054 253 ntBASIC16.63■□□□□ 0.25
LCMT2O60294 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.63■□□□□ 0.25
LCMT2O60294 AL031008.1-201ENST00000619963 541 ntBASIC16.63■□□□□ 0.25
LCMT2O60294 AL139288.1-201ENST00000623748 933 ntBASIC16.63■□□□□ 0.25
LCMT2O60294 TP73-AS1-207ENST00000624167 988 ntBASIC16.63■□□□□ 0.25
LCMT2O60294 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LCMT2O60294 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
LCMT2O60294 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms