Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC28A1O00337 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC28A1O00337 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 SLC25A1P3-201ENST00000395415 828 ntBASIC16.78■□□□□ 0.28
SLC28A1O00337 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC28A1O00337 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC28A1O00337 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC28A1O00337 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.78■□□□□ 0.28
SLC28A1O00337 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC28A1O00337 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC28A1O00337 AL138831.2-201ENST00000606564 490 ntBASIC16.78■□□□□ 0.28
SLC28A1O00337 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC28A1O00337 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC28A1O00337 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC28A1O00337 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC28A1O00337 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
SLC28A1O00337 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
SLC28A1O00337 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SLC28A1O00337 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC28A1O00337 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC28A1O00337 FAM220CP-201ENST00000395253 831 ntBASIC16.77■□□□□ 0.28
SLC28A1O00337 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SLC28A1O00337 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC28A1O00337 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC28A1O00337 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC28A1O00337 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
SLC28A1O00337 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SLC28A1O00337 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC28A1O00337 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A1O00337 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC28A1O00337 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A1O00337 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A1O00337 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A1O00337 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SLC28A1O00337 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A1O00337 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A1O00337 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SLC28A1O00337 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC28A1O00337 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A1O00337 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC28A1O00337 AC106886.4-201ENST00000623557 2502 ntBASIC16.76■□□□□ 0.27
SLC28A1O00337 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC28A1O00337 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.76■□□□□ 0.27
SLC28A1O00337 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC28A1O00337 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC28A1O00337 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC28A1O00337 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC28A1O00337 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A1O00337 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC28A1O00337 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 AC011498.5-201ENST00000592027 486 ntBASIC16.76■□□□□ 0.27
SLC28A1O00337 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A1O00337 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms