Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL20A1Q9P218 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 AC004877.2-201ENST00000623941 599 ntBASIC19.61■□□□□ 0.73
COL20A1Q9P218 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL20A1Q9P218 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL20A1Q9P218 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL20A1Q9P218 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL20A1Q9P218 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.61■□□□□ 0.73
COL20A1Q9P218 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL20A1Q9P218 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.6■□□□□ 0.73
COL20A1Q9P218 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COL20A1Q9P218 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 AC018470.1-201ENST00000624790 3129 ntBASIC19.6■□□□□ 0.73
COL20A1Q9P218 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 AC092183.1-201ENST00000469884 875 ntBASIC19.6■□□□□ 0.73
COL20A1Q9P218 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.6■□□□□ 0.73
COL20A1Q9P218 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.6■□□□□ 0.73
COL20A1Q9P218 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.6■□□□□ 0.73
COL20A1Q9P218 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL20A1Q9P218 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL20A1Q9P218 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 AC087163.2-201ENST00000457299 853 ntBASIC19.59■□□□□ 0.73
COL20A1Q9P218 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 KRT19P2-202ENST00000557173 1012 ntBASIC19.59■□□□□ 0.73
COL20A1Q9P218 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 AC134684.3-201ENST00000641758 218 ntBASIC19.59■□□□□ 0.73
COL20A1Q9P218 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL20A1Q9P218 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.59■□□□□ 0.73
COL20A1Q9P218 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL20A1Q9P218 BCAR1-209ENST00000546196 1340 ntBASIC19.58■□□□□ 0.73
COL20A1Q9P218 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL20A1Q9P218 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL20A1Q9P218 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL20A1Q9P218 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 SLC25A1P3-201ENST00000395415 828 ntBASIC19.58■□□□□ 0.72
COL20A1Q9P218 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 MIR3687-2-201ENST00000577708 61 ntBASIC19.58■□□□□ 0.72
COL20A1Q9P218 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.58■□□□□ 0.72
COL20A1Q9P218 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms