Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 STK19B-204ENST00000512515 211 ntBASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHAF3Q9NRP4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 PMPCAP1-201ENST00000508114 1576 ntBASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 KLF4P1-201ENST00000412782 1185 ntBASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 SCARNA2-201ENST00000458748 420 ntBASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 AC106795.1-205ENST00000512851 1056 ntBASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 STK25P1-201ENST00000585406 838 ntBASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 AL139327.4-201ENST00000612362 153 ntBASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.02■□□□□ 0.16
SDHAF3Q9NRP4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHAF3Q9NRP4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 FAAHP1-202ENST00000446499 1238 ntBASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 MTDHP3-201ENST00000594186 672 ntBASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 NFIC-211ENST00000641145 8399 ntBASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDHAF3Q9NRP4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms