Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 AC006116.8-202ENST00000587620 1550 ntBASIC18.41■□□□□ 0.54
TLR9Q9NR96 AC104581.1-202ENST00000635932 2618 ntBASIC18.41■□□□□ 0.54
TLR9Q9NR96 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TLR9Q9NR96 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR9Q9NR96 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 AL513480.1-201ENST00000451731 511 ntBASIC18.4■□□□□ 0.54
TLR9Q9NR96 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 AC109322.1-201ENST00000524499 1264 ntBASIC18.4■□□□□ 0.54
TLR9Q9NR96 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 AC092919.2-201ENST00000623631 1645 ntBASIC18.4■□□□□ 0.54
TLR9Q9NR96 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.4■□□□□ 0.54
TLR9Q9NR96 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR9Q9NR96 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TLR9Q9NR96 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
TLR9Q9NR96 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TLR9Q9NR96 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TLR9Q9NR96 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 LINC00628-201ENST00000628516 1289 ntBASIC18.39■□□□□ 0.53
TLR9Q9NR96 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TLR9Q9NR96 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.39■□□□□ 0.53
TLR9Q9NR96 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 FAM86GP-201ENST00000448322 971 ntBASIC18.38■□□□□ 0.53
TLR9Q9NR96 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TLR9Q9NR96 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TLR9Q9NR96 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 AC135776.1-201ENST00000319817 2481 ntBASIC18.37■□□□□ 0.53
TLR9Q9NR96 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms