Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 AC114341.1-201ENST00000618070 349 ntBASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 TP73-AS1-210ENST00000637775 1455 ntBASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 AC022898.2-201ENST00000616822 1312 ntBASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 KRT18P55-202ENST00000578578 1546 ntBASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 AC009533.2-201ENST00000543664 586 ntBASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 MIR5100-201ENST00000579544 119 ntBASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCGF1Q9BSM1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 AC080080.1-201ENST00000625121 2420 ntBASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 RCN1P2-201ENST00000398357 915 ntBASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.66□□□□□ -0.06
PCGF1Q9BSM1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms