Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TM9SF2Q99805 AL023806.1-201ENST00000603994 1649 ntBASIC16.23■□□□□ 0.19
TM9SF2Q99805 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TM9SF2Q99805 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 RN7SL606P-201ENST00000472779 293 ntBASIC16.22■□□□□ 0.19
TM9SF2Q99805 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 AC011840.4-201ENST00000578471 627 ntBASIC16.22■□□□□ 0.19
TM9SF2Q99805 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 AC004263.2-201ENST00000617183 678 ntBASIC16.22■□□□□ 0.19
TM9SF2Q99805 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 AC233702.3-201ENST00000578656 1387 ntBASIC16.22■□□□□ 0.19
TM9SF2Q99805 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TM9SF2Q99805 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF2Q99805 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 SDHAP2-201ENST00000455183 2001 ntBASIC16.21■□□□□ 0.19
TM9SF2Q99805 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 AC246785.2-201ENST00000432512 513 ntBASIC16.21■□□□□ 0.19
TM9SF2Q99805 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 AC074051.2-201ENST00000565115 352 ntBASIC16.21■□□□□ 0.19
TM9SF2Q99805 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF2Q99805 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF2Q99805 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms