Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ABCA3Q99758 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ABCA3Q99758 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
ABCA3Q99758 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
ABCA3Q99758 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ABCA3Q99758 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
ABCA3Q99758 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC22.9■■□□□ 1.26
ABCA3Q99758 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC22.9■■□□□ 1.26
ABCA3Q99758 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC22.9■■□□□ 1.26
ABCA3Q99758 AL844908.2-201ENST00000609461 460 ntBASIC22.9■■□□□ 1.26
ABCA3Q99758 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.9■■□□□ 1.26
ABCA3Q99758 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ABCA3Q99758 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ABCA3Q99758 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.9■■□□□ 1.26
ABCA3Q99758 AC135776.1-201ENST00000319817 2481 ntBASIC22.89■■□□□ 1.26
ABCA3Q99758 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.26
ABCA3Q99758 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
ABCA3Q99758 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
ABCA3Q99758 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ABCA3Q99758 MIR1909-201ENST00000411312 80 ntBASIC22.89■■□□□ 1.26
ABCA3Q99758 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC22.89■■□□□ 1.26
ABCA3Q99758 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.89■■□□□ 1.25
ABCA3Q99758 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ABCA3Q99758 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ABCA3Q99758 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ABCA3Q99758 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ABCA3Q99758 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.89■■□□□ 1.25
ABCA3Q99758 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.89■■□□□ 1.25
ABCA3Q99758 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC22.89■■□□□ 1.25
ABCA3Q99758 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
ABCA3Q99758 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA3Q99758 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA3Q99758 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA3Q99758 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA3Q99758 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.88■■□□□ 1.25
ABCA3Q99758 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC22.88■■□□□ 1.25
ABCA3Q99758 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC22.88■■□□□ 1.25
ABCA3Q99758 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC22.88■■□□□ 1.25
ABCA3Q99758 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA3Q99758 AC012569.1-201ENST00000591191 1524 ntBASIC22.88■■□□□ 1.25
ABCA3Q99758 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA3Q99758 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.88■■□□□ 1.25
ABCA3Q99758 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA3Q99758 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.88■■□□□ 1.25
ABCA3Q99758 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA3Q99758 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
ABCA3Q99758 BANF1P1-201ENST00000553684 263 ntBASIC22.88■■□□□ 1.25
ABCA3Q99758 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC22.88■■□□□ 1.25
ABCA3Q99758 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.87■■□□□ 1.25
ABCA3Q99758 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA3Q99758 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA3Q99758 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA3Q99758 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA3Q99758 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
ABCA3Q99758 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
ABCA3Q99758 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.87■■□□□ 1.25
ABCA3Q99758 GPR53P-205ENST00000457298 1084 ntBASIC22.87■■□□□ 1.25
ABCA3Q99758 CDK4-206ENST00000549606 558 ntTSL 2 BASIC22.87■■□□□ 1.25
ABCA3Q99758 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA3Q99758 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC22.87■■□□□ 1.25
ABCA3Q99758 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC22.87■■□□□ 1.25
ABCA3Q99758 AC008738.7-201ENST00000609744 511 ntBASIC22.87■■□□□ 1.25
ABCA3Q99758 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA3Q99758 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA3Q99758 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA3Q99758 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
ABCA3Q99758 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ABCA3Q99758 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
ABCA3Q99758 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ABCA3Q99758 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ABCA3Q99758 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ABCA3Q99758 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.86■■□□□ 1.25
ABCA3Q99758 HCG4-201ENST00000418983 998 ntBASIC22.86■■□□□ 1.25
ABCA3Q99758 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.86■■□□□ 1.25
ABCA3Q99758 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC22.86■■□□□ 1.25
ABCA3Q99758 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.86■■□□□ 1.25
ABCA3Q99758 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC22.86■■□□□ 1.25
ABCA3Q99758 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.86■■□□□ 1.25
ABCA3Q99758 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.86■■□□□ 1.25
ABCA3Q99758 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ABCA3Q99758 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ABCA3Q99758 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC22.86■■□□□ 1.25
ABCA3Q99758 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ABCA3Q99758 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ABCA3Q99758 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 KRT17P7-201ENST00000451704 1104 ntBASIC22.85■■□□□ 1.25
ABCA3Q99758 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC22.85■■□□□ 1.25
ABCA3Q99758 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.85■■□□□ 1.25
ABCA3Q99758 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.85■■□□□ 1.25
ABCA3Q99758 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA3Q99758 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms