Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 AKAP8P1-201ENST00000434743 1349 ntBASIC18.5■□□□□ 0.55
RAD9AQ99638 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.5■□□□□ 0.55
RAD9AQ99638 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RAD9AQ99638 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.5■□□□□ 0.55
RAD9AQ99638 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 AC107890.1-201ENST00000422478 521 ntBASIC18.5■□□□□ 0.55
RAD9AQ99638 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.5■□□□□ 0.55
RAD9AQ99638 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RAD9AQ99638 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 AL135999.2-201ENST00000622438 1686 ntBASIC18.5■□□□□ 0.55
RAD9AQ99638 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RAD9AQ99638 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD9AQ99638 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
RAD9AQ99638 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
RAD9AQ99638 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAD9AQ99638 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RAD9AQ99638 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD9AQ99638 GK-202ENST00000378941 458 ntTSL 3 BASIC18.49■□□□□ 0.55
RAD9AQ99638 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAD9AQ99638 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.49■□□□□ 0.55
RAD9AQ99638 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.49■□□□□ 0.55
RAD9AQ99638 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RAD9AQ99638 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD9AQ99638 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.49■□□□□ 0.55
RAD9AQ99638 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RAD9AQ99638 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.49■□□□□ 0.55
RAD9AQ99638 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.49■□□□□ 0.55
RAD9AQ99638 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RAD9AQ99638 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.49■□□□□ 0.55
RAD9AQ99638 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
RAD9AQ99638 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD9AQ99638 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD9AQ99638 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAD9AQ99638 AP000974.1-201ENST00000623909 2387 ntBASIC18.48■□□□□ 0.55
RAD9AQ99638 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAD9AQ99638 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAD9AQ99638 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RAD9AQ99638 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAD9AQ99638 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.48■□□□□ 0.55
RAD9AQ99638 GPS2P2-201ENST00000430745 888 ntBASIC18.48■□□□□ 0.55
RAD9AQ99638 FAM207CP-201ENST00000443486 507 ntBASIC18.48■□□□□ 0.55
RAD9AQ99638 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAD9AQ99638 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.48■□□□□ 0.55
RAD9AQ99638 AL135744.1-201ENST00000565098 629 ntBASIC18.48■□□□□ 0.55
RAD9AQ99638 RARRES2P8-201ENST00000566335 367 ntBASIC18.48■□□□□ 0.55
RAD9AQ99638 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.48■□□□□ 0.55
RAD9AQ99638 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RAD9AQ99638 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RAD9AQ99638 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAD9AQ99638 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAD9AQ99638 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.48■□□□□ 0.55
RAD9AQ99638 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.48■□□□□ 0.55
RAD9AQ99638 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAD9AQ99638 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAD9AQ99638 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAD9AQ99638 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.47■□□□□ 0.55
RAD9AQ99638 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.47■□□□□ 0.55
RAD9AQ99638 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAD9AQ99638 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAD9AQ99638 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.47■□□□□ 0.55
RAD9AQ99638 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAD9AQ99638 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAD9AQ99638 MIR661-201ENST00000384842 89 ntBASIC18.47■□□□□ 0.55
RAD9AQ99638 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.47■□□□□ 0.55
RAD9AQ99638 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.47■□□□□ 0.55
RAD9AQ99638 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.47■□□□□ 0.55
RAD9AQ99638 RBPMS2P1-201ENST00000437762 623 ntBASIC18.47■□□□□ 0.55
RAD9AQ99638 AC125807.1-201ENST00000483097 614 ntBASIC18.47■□□□□ 0.55
RAD9AQ99638 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.47■□□□□ 0.55
RAD9AQ99638 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.47■□□□□ 0.55
RAD9AQ99638 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RAD9AQ99638 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAD9AQ99638 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RAD9AQ99638 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAD9AQ99638 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAD9AQ99638 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.47■□□□□ 0.55
RAD9AQ99638 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms