Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 AL590787.1-201ENST00000568856 1315 ntBASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 AL513480.1-201ENST00000451731 511 ntBASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 AC112191.1-201ENST00000523689 701 ntBASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 AL390754.1-201ENST00000619088 582 ntBASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TUBGCP6Q96RT7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 TFAMP1-201ENST00000412727 736 ntBASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TUBGCP6Q96RT7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 OR8S1-201ENST00000310194 1080 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 CNN2P2-201ENST00000443536 909 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 CNN2P3-201ENST00000450201 906 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 AC087163.2-201ENST00000457299 853 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 AL136317.3-201ENST00000618497 906 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 LETM1P2-201ENST00000597330 2178 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 AC055876.3-201ENST00000431496 288 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 AC069335.1-201ENST00000489972 472 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 SLC25A39P2-201ENST00000537614 270 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 ACTL9-202ENST00000612068 1252 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 AC138649.4-201ENST00000612222 287 ntBASIC22.2■■□□□ 1.14
TUBGCP6Q96RT7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TUBGCP6Q96RT7 FAM58DP-201ENST00000428076 619 ntBASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms