Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUSD3Q96L08 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SUSD3Q96L08 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.39■□□□□ 0.53
SUSD3Q96L08 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.39■□□□□ 0.53
SUSD3Q96L08 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.39■□□□□ 0.53
SUSD3Q96L08 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.39■□□□□ 0.53
SUSD3Q96L08 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.39■□□□□ 0.53
SUSD3Q96L08 AC010507.1-201ENST00000633895 436 ntBASIC18.39■□□□□ 0.53
SUSD3Q96L08 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUSD3Q96L08 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUSD3Q96L08 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUSD3Q96L08 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUSD3Q96L08 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.39■□□□□ 0.53
SUSD3Q96L08 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 RHOQP3-201ENST00000437982 621 ntBASIC18.38■□□□□ 0.53
SUSD3Q96L08 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SUSD3Q96L08 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SUSD3Q96L08 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 AL513190.1-201ENST00000621254 727 ntBASIC18.37■□□□□ 0.53
SUSD3Q96L08 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUSD3Q96L08 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SUSD3Q96L08 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUSD3Q96L08 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SUSD3Q96L08 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUSD3Q96L08 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 AC004877.2-201ENST00000623941 599 ntBASIC18.36■□□□□ 0.53
SUSD3Q96L08 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.36■□□□□ 0.53
SUSD3Q96L08 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUSD3Q96L08 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SUSD3Q96L08 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUSD3Q96L08 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUSD3Q96L08 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUSD3Q96L08 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUSD3Q96L08 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUSD3Q96L08 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SUSD3Q96L08 AC087163.2-201ENST00000457299 853 ntBASIC18.35■□□□□ 0.53
SUSD3Q96L08 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.35■□□□□ 0.53
SUSD3Q96L08 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms