Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.38■□□□□ 0.53
RNF25Q96BH1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 AC018695.7-201ENST00000624587 2492 ntBASIC18.38■□□□□ 0.53
RNF25Q96BH1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
RNF25Q96BH1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF25Q96BH1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF25Q96BH1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF25Q96BH1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF25Q96BH1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 AL645929.1-201ENST00000420084 975 ntBASIC18.37■□□□□ 0.53
RNF25Q96BH1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF25Q96BH1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 UBALD1-205ENST00000590891 2641 ntBASIC18.37■□□□□ 0.53
RNF25Q96BH1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF25Q96BH1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 AC010460.3-201ENST00000511359 1579 ntBASIC18.37■□□□□ 0.53
RNF25Q96BH1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF25Q96BH1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF25Q96BH1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF25Q96BH1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF25Q96BH1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF25Q96BH1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF25Q96BH1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF25Q96BH1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF25Q96BH1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF25Q96BH1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 AC096633.1-201ENST00000422446 749 ntBASIC18.36■□□□□ 0.53
RNF25Q96BH1 TMPOP1-202ENST00000424642 1267 ntBASIC18.36■□□□□ 0.53
RNF25Q96BH1 AC005104.2-201ENST00000427818 678 ntBASIC18.36■□□□□ 0.53
RNF25Q96BH1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF25Q96BH1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms