Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.31■□□□□ 0.36
SCAMP4Q969E2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 AL135999.2-201ENST00000622438 1686 ntBASIC17.3■□□□□ 0.36
SCAMP4Q969E2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP4Q969E2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 AC243591.1-201ENST00000452967 1364 ntBASIC17.29■□□□□ 0.36
SCAMP4Q969E2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.29■□□□□ 0.36
SCAMP4Q969E2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 LAGE3P1-201ENST00000425356 484 ntBASIC17.29■□□□□ 0.36
SCAMP4Q969E2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP4Q969E2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 PCDHB18P-201ENST00000524813 2368 ntBASIC17.28■□□□□ 0.36
SCAMP4Q969E2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 RPS2P28-201ENST00000314255 741 ntBASIC17.28■□□□□ 0.36
SCAMP4Q969E2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms