Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AP006294.1-201ENST00000415407 339 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 BNIP3P42-201ENST00000454982 569 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 GIMAP3P-201ENST00000495150 836 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 BANF1P1-201ENST00000553684 263 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 BNIP3P29-201ENST00000598302 571 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AC011447.5-201ENST00000616168 564 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AC093677.2-201ENST00000600169 1863 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 AC005332.7-201ENST00000614046 2005 ntBASIC11.59□□□□□ -0.55
ALMS1Q8TCU4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
ALMS1Q8TCU4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 AC009118.2-201ENST00000613275 655 ntBASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 AL162274.1-201ENST00000617191 1098 ntBASIC11.58□□□□□ -0.56
ALMS1Q8TCU4 ANKRD19P-201ENST00000338192 862 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 AC092658.1-201ENST00000505836 891 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 ALG1L8P-201ENST00000533887 760 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 RAB43P1-201ENST00000561790 589 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 AC106886.1-201ENST00000568660 600 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 AC004945.1-201ENST00000416738 983 ntBASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.57□□□□□ -0.56
ALMS1Q8TCU4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms