Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 ADH5P3-201ENST00000433842 1137 ntBASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 AC112191.1-201ENST00000523689 701 ntBASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 AP001002.2-201ENST00000625137 386 ntBASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNIP1Q8TAD8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 AL627223.1-201ENST00000416693 442 ntBASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 BASP1P1-201ENST00000430708 665 ntBASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 CNN2P2-201ENST00000443536 909 ntBASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 CNN2P3-201ENST00000450201 906 ntBASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 DUX4L27-201ENST00000554796 1261 ntBASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 AL136317.3-201ENST00000618497 906 ntBASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNIP1Q8TAD8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.39■□□□□ 0.22
SNIP1Q8TAD8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms