Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 AC018470.1-201ENST00000624790 3129 ntBASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SCN4BQ8IWT1 AC007613.1-201ENST00000572811 2597 ntBASIC18.39■□□□□ 0.54
SCN4BQ8IWT1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SCN4BQ8IWT1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SCN4BQ8IWT1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SCN4BQ8IWT1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.39■□□□□ 0.54
SCN4BQ8IWT1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 POLD2P1-201ENST00000511220 997 ntBASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 AC004706.3-202ENST00000621574 984 ntBASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 AC005593.1-201ENST00000624894 515 ntBASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SCN4BQ8IWT1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 AC073621.1-201ENST00000392730 636 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 ELK2BP-201ENST00000415014 1224 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 KRT18P27-201ENST00000427733 1299 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 AC136632.2-201ENST00000512891 861 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 KRT18P58-201ENST00000527480 1120 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 UNC93B6-202ENST00000528242 690 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 Z83851.2-201ENST00000609564 659 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 LINC01451-201ENST00000623792 534 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 AC006504.4-201ENST00000592118 1568 ntBASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN4BQ8IWT1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN4BQ8IWT1 SLC25A6P5-201ENST00000435663 894 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms