Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 AC105020.1-201ENST00000435356 2205 ntBASIC15.65■□□□□ 0.1
CCDC58Q4VC31 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC58Q4VC31 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 PVRIG2P-201ENST00000435460 978 ntBASIC15.64■□□□□ 0.09
CCDC58Q4VC31 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 ITM2C-210ENST00000620962 501 ntBASIC15.64■□□□□ 0.09
CCDC58Q4VC31 AC132872.4-202ENST00000622924 2756 ntBASIC15.64■□□□□ 0.09
CCDC58Q4VC31 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 AC092865.7-201ENST00000641832 219 ntBASIC15.64■□□□□ 0.09
CCDC58Q4VC31 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.64■□□□□ 0.09
CCDC58Q4VC31 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC58Q4VC31 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 KRT18P65-201ENST00000439811 1286 ntBASIC15.63■□□□□ 0.09
CCDC58Q4VC31 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 MIR3917-201ENST00000580971 93 ntBASIC15.63■□□□□ 0.09
CCDC58Q4VC31 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC58Q4VC31 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 FAM201B-201ENST00000458407 597 ntBASIC15.62■□□□□ 0.09
CCDC58Q4VC31 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 FITM1-202ENST00000559294 800 ntBASIC15.62■□□□□ 0.09
CCDC58Q4VC31 AP003071.4-201ENST00000562276 1284 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms