Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX4P78413 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IRX4P78413 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IRX4P78413 AC080080.1-201ENST00000625121 2420 ntBASIC18.18■□□□□ 0.5
IRX4P78413 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IRX4P78413 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 AC243591.1-201ENST00000452967 1364 ntBASIC18.17■□□□□ 0.5
IRX4P78413 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
IRX4P78413 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.17■□□□□ 0.5
IRX4P78413 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 AC034236.2-201ENST00000606662 1610 ntBASIC18.17■□□□□ 0.5
IRX4P78413 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.17■□□□□ 0.5
IRX4P78413 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.17■□□□□ 0.5
IRX4P78413 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.17■□□□□ 0.5
IRX4P78413 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.17■□□□□ 0.5
IRX4P78413 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.17■□□□□ 0.5
IRX4P78413 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.17■□□□□ 0.5
IRX4P78413 MIR5100-201ENST00000579544 119 ntBASIC18.17■□□□□ 0.5
IRX4P78413 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.17■□□□□ 0.5
IRX4P78413 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.17■□□□□ 0.5
IRX4P78413 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
IRX4P78413 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.17■□□□□ 0.5
IRX4P78413 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
IRX4P78413 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 PCDHA12-202ENST00000613593 2588 ntBASIC18.17■□□□□ 0.5
IRX4P78413 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
IRX4P78413 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX4P78413 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
IRX4P78413 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
IRX4P78413 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
IRX4P78413 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 AC099398.1-201ENST00000567919 2776 ntBASIC18.16■□□□□ 0.5
IRX4P78413 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.16■□□□□ 0.5
IRX4P78413 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.16■□□□□ 0.5
IRX4P78413 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
IRX4P78413 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
IRX4P78413 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 RPL13AP23-201ENST00000480739 586 ntBASIC18.16■□□□□ 0.5
IRX4P78413 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.16■□□□□ 0.5
IRX4P78413 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.16■□□□□ 0.5
IRX4P78413 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX4P78413 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX4P78413 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
IRX4P78413 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
IRX4P78413 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
IRX4P78413 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX4P78413 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
IRX4P78413 PP12613-201ENST00000424958 2230 ntBASIC18.15■□□□□ 0.5
IRX4P78413 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
IRX4P78413 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 FAM220CP-201ENST00000395253 831 ntBASIC18.15■□□□□ 0.5
IRX4P78413 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.15■□□□□ 0.5
IRX4P78413 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.15■□□□□ 0.5
IRX4P78413 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.15■□□□□ 0.5
IRX4P78413 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.15■□□□□ 0.5
IRX4P78413 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.15■□□□□ 0.5
IRX4P78413 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.15■□□□□ 0.5
IRX4P78413 BNIP3P18-201ENST00000593976 575 ntBASIC18.15■□□□□ 0.5
IRX4P78413 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
IRX4P78413 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX4P78413 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
IRX4P78413 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
IRX4P78413 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms