Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH8P55286 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH8P55286 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDH8P55286 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH8P55286 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CDH8P55286 AC018712.1-201ENST00000455767 687 ntBASIC18.6■□□□□ 0.57
CDH8P55286 AC073648.2-201ENST00000510116 352 ntBASIC18.6■□□□□ 0.57
CDH8P55286 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH8P55286 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH8P55286 SLC25A6P4-201ENST00000586535 553 ntBASIC18.6■□□□□ 0.57
CDH8P55286 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDH8P55286 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH8P55286 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH8P55286 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH8P55286 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH8P55286 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH8P55286 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH8P55286 AC097637.2-201ENST00000624096 1997 ntBASIC18.59■□□□□ 0.57
CDH8P55286 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH8P55286 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH8P55286 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 KRT18P67-201ENST00000432816 1264 ntBASIC18.59■□□□□ 0.57
CDH8P55286 FDX1P1-201ENST00000449115 551 ntBASIC18.59■□□□□ 0.57
CDH8P55286 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.59■□□□□ 0.57
CDH8P55286 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH8P55286 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH8P55286 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDH8P55286 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH8P55286 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH8P55286 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDH8P55286 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH8P55286 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH8P55286 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.58■□□□□ 0.57
CDH8P55286 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.58■□□□□ 0.57
CDH8P55286 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH8P55286 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH8P55286 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CDH8P55286 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CDH8P55286 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH8P55286 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.58■□□□□ 0.56
CDH8P55286 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.58■□□□□ 0.56
CDH8P55286 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.58■□□□□ 0.56
CDH8P55286 RNA5SP419-201ENST00000515908 135 ntBASIC18.58■□□□□ 0.56
CDH8P55286 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH8P55286 AL049840.3-201ENST00000602669 611 ntBASIC18.58■□□□□ 0.56
CDH8P55286 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.58■□□□□ 0.56
CDH8P55286 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH8P55286 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH8P55286 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH8P55286 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDH8P55286 AC026471.1-201ENST00000564629 3026 ntBASIC18.57■□□□□ 0.56
CDH8P55286 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH8P55286 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CDH8P55286 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 AF186996.4-201ENST00000467186 377 ntBASIC18.57■□□□□ 0.56
CDH8P55286 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH8P55286 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.57■□□□□ 0.56
CDH8P55286 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH8P55286 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH8P55286 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH8P55286 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms