Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACLYP53396 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ACLYP53396 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.08■□□□□ 0.65
ACLYP53396 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ACLYP53396 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACLYP53396 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACLYP53396 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACLYP53396 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.08■□□□□ 0.64
ACLYP53396 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACLYP53396 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACLYP53396 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ACLYP53396 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.08■□□□□ 0.64
ACLYP53396 AC236430.1-201ENST00000402231 743 ntBASIC19.08■□□□□ 0.64
ACLYP53396 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.08■□□□□ 0.64
ACLYP53396 GPS2P2-201ENST00000430745 888 ntBASIC19.08■□□□□ 0.64
ACLYP53396 KLF2P3-201ENST00000451977 1087 ntBASIC19.08■□□□□ 0.64
ACLYP53396 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.08■□□□□ 0.64
ACLYP53396 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.08■□□□□ 0.64
ACLYP53396 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.08■□□□□ 0.64
ACLYP53396 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.08■□□□□ 0.64
ACLYP53396 AL135744.1-201ENST00000565098 629 ntBASIC19.08■□□□□ 0.64
ACLYP53396 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.08■□□□□ 0.64
ACLYP53396 AL035252.4-201ENST00000624174 288 ntBASIC19.08■□□□□ 0.64
ACLYP53396 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACLYP53396 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.08■□□□□ 0.64
ACLYP53396 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACLYP53396 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACLYP53396 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.08■□□□□ 0.64
ACLYP53396 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ACLYP53396 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ACLYP53396 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ACLYP53396 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ACLYP53396 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ACLYP53396 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ACLYP53396 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.07■□□□□ 0.64
ACLYP53396 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.07■□□□□ 0.64
ACLYP53396 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.07■□□□□ 0.64
ACLYP53396 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.07■□□□□ 0.64
ACLYP53396 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.07■□□□□ 0.64
ACLYP53396 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.07■□□□□ 0.64
ACLYP53396 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 AC005034.1-201ENST00000426657 489 ntBASIC19.07■□□□□ 0.64
ACLYP53396 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.07■□□□□ 0.64
ACLYP53396 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.07■□□□□ 0.64
ACLYP53396 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.07■□□□□ 0.64
ACLYP53396 DUX4L17-201ENST00000557360 1267 ntBASIC19.07■□□□□ 0.64
ACLYP53396 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.07■□□□□ 0.64
ACLYP53396 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 RARRES2P8-201ENST00000566335 367 ntBASIC19.07■□□□□ 0.64
ACLYP53396 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.07■□□□□ 0.64
ACLYP53396 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.07■□□□□ 0.64
ACLYP53396 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.07■□□□□ 0.64
ACLYP53396 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACLYP53396 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.07■□□□□ 0.64
ACLYP53396 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACLYP53396 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
ACLYP53396 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ACLYP53396 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.06■□□□□ 0.64
ACLYP53396 AKAP8P1-201ENST00000434743 1349 ntBASIC19.06■□□□□ 0.64
ACLYP53396 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACLYP53396 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ACLYP53396 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ACLYP53396 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.06■□□□□ 0.64
ACLYP53396 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
ACLYP53396 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACLYP53396 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ACLYP53396 AC002472.2-201ENST00000442739 958 ntBASIC19.06■□□□□ 0.64
ACLYP53396 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.06■□□□□ 0.64
ACLYP53396 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACLYP53396 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.06■□□□□ 0.64
ACLYP53396 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.06■□□□□ 0.64
ACLYP53396 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.06■□□□□ 0.64
ACLYP53396 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.06■□□□□ 0.64
ACLYP53396 MIR4515-201ENST00000584082 81 ntBASIC19.06■□□□□ 0.64
ACLYP53396 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.06■□□□□ 0.64
ACLYP53396 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.06■□□□□ 0.64
ACLYP53396 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.06■□□□□ 0.64
ACLYP53396 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACLYP53396 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ACLYP53396 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACLYP53396 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.06■□□□□ 0.64
ACLYP53396 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.05■□□□□ 0.64
ACLYP53396 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms