Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR5100-201ENST00000579544 119 ntBASIC18.01■□□□□ 0.47
NEK3P51956 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEK3P51956 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEK3P51956 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEK3P51956 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NEK3P51956 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.01■□□□□ 0.47
NEK3P51956 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.01■□□□□ 0.47
NEK3P51956 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.01■□□□□ 0.47
NEK3P51956 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEK3P51956 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
NEK3P51956 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEK3P51956 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.01■□□□□ 0.47
NEK3P51956 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NEK3P51956 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NEK3P51956 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18■□□□□ 0.47
NEK3P51956 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18■□□□□ 0.47
NEK3P51956 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18■□□□□ 0.47
NEK3P51956 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18■□□□□ 0.47
NEK3P51956 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18■□□□□ 0.47
NEK3P51956 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18■□□□□ 0.47
NEK3P51956 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
NEK3P51956 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
NEK3P51956 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NEK3P51956 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18■□□□□ 0.47
NEK3P51956 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
NEK3P51956 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NEK3P51956 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18■□□□□ 0.47
NEK3P51956 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18■□□□□ 0.47
NEK3P51956 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18■□□□□ 0.47
NEK3P51956 REXO1L6P-202ENST00000619970 1078 ntBASIC18■□□□□ 0.47
NEK3P51956 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18■□□□□ 0.47
NEK3P51956 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
NEK3P51956 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18■□□□□ 0.47
NEK3P51956 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NEK3P51956 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18■□□□□ 0.47
NEK3P51956 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEK3P51956 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.99■□□□□ 0.47
NEK3P51956 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.99■□□□□ 0.47
NEK3P51956 CROCCP2-202ENST00000412962 2773 ntBASIC17.99■□□□□ 0.47
NEK3P51956 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NEK3P51956 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 AL121761.2-201ENST00000598007 1648 ntBASIC17.99■□□□□ 0.47
NEK3P51956 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.99■□□□□ 0.47
NEK3P51956 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 AKR1C7P-201ENST00000305623 895 ntBASIC17.99■□□□□ 0.47
NEK3P51956 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.99■□□□□ 0.47
NEK3P51956 RCN1P2-201ENST00000398357 915 ntBASIC17.99■□□□□ 0.47
NEK3P51956 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.99■□□□□ 0.47
NEK3P51956 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 SAPCD2P3-201ENST00000455031 850 ntBASIC17.99■□□□□ 0.47
NEK3P51956 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.99■□□□□ 0.47
NEK3P51956 DUTP2-201ENST00000519164 463 ntBASIC17.99■□□□□ 0.47
NEK3P51956 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NEK3P51956 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
NEK3P51956 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.99■□□□□ 0.47
NEK3P51956 AL031008.1-201ENST00000619963 541 ntBASIC17.99■□□□□ 0.47
NEK3P51956 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
NEK3P51956 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 AC011676.5-201ENST00000624864 2660 ntBASIC17.99■□□□□ 0.47
NEK3P51956 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
NEK3P51956 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEK3P51956 AC100803.2-201ENST00000562459 1963 ntBASIC17.99■□□□□ 0.47
NEK3P51956 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
NEK3P51956 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NEK3P51956 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
NEK3P51956 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.98■□□□□ 0.47
NEK3P51956 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEK3P51956 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.98■□□□□ 0.47
NEK3P51956 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.98■□□□□ 0.47
NEK3P51956 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.98■□□□□ 0.47
NEK3P51956 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms