Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL121956.5-201ENST00000625261 221 ntBASIC18.26■□□□□ 0.51
SLC1A1P43005 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC1A1P43005 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A1P43005 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A1P43005 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC1A1P43005 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC1A1P43005 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A1P43005 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SLC1A1P43005 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC1A1P43005 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC1A1P43005 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC1A1P43005 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC1A1P43005 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC1A1P43005 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC1A1P43005 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SLC1A1P43005 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 VENTXP7-201ENST00000475503 772 ntBASIC18.25■□□□□ 0.51
SLC1A1P43005 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
SLC1A1P43005 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SLC1A1P43005 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC1A1P43005 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.25■□□□□ 0.51
SLC1A1P43005 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 AC106886.4-201ENST00000623557 2502 ntBASIC18.25■□□□□ 0.51
SLC1A1P43005 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC1A1P43005 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC1A1P43005 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC1A1P43005 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A1P43005 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.24■□□□□ 0.51
SLC1A1P43005 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SLC1A1P43005 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC1A1P43005 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLC1A1P43005 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 AC124947.2-201ENST00000547118 1133 ntBASIC18.24■□□□□ 0.51
SLC1A1P43005 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 AL121672.3-201ENST00000608644 468 ntBASIC18.24■□□□□ 0.51
SLC1A1P43005 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC1A1P43005 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC1A1P43005 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SLC1A1P43005 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A1P43005 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SLC1A1P43005 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SLC1A1P43005 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SLC1A1P43005 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SLC1A1P43005 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC1A1P43005 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC1A1P43005 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SLC1A1P43005 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC1A1P43005 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A1P43005 AL031133.1-201ENST00000406807 723 ntBASIC18.23■□□□□ 0.51
SLC1A1P43005 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC1A1P43005 CHCHD2P8-201ENST00000429873 447 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms