Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.33■□□□□ 0.53
MMP8P22894 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MMP8P22894 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
MMP8P22894 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP8P22894 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.33■□□□□ 0.52
MMP8P22894 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.33■□□□□ 0.52
MMP8P22894 FOSL1P1-201ENST00000511041 816 ntBASIC18.33■□□□□ 0.52
MMP8P22894 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.33■□□□□ 0.52
MMP8P22894 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.33■□□□□ 0.52
MMP8P22894 MIR3652-201ENST00000579335 131 ntBASIC18.33■□□□□ 0.52
MMP8P22894 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP8P22894 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MMP8P22894 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.33■□□□□ 0.52
MMP8P22894 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MMP8P22894 AC073592.4-201ENST00000623827 446 ntBASIC18.33■□□□□ 0.52
MMP8P22894 AC148477.5-201ENST00000625164 1645 ntBASIC18.33■□□□□ 0.52
MMP8P22894 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP8P22894 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP8P22894 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
MMP8P22894 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.33■□□□□ 0.52
MMP8P22894 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
MMP8P22894 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP8P22894 SIGLEC16-201ENST00000599858 1437 ntBASIC18.32■□□□□ 0.52
MMP8P22894 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP8P22894 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP8P22894 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
MMP8P22894 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MMP8P22894 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MMP8P22894 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP8P22894 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.32■□□□□ 0.52
MMP8P22894 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP8P22894 AL020989.1-201ENST00000422979 469 ntBASIC18.32■□□□□ 0.52
MMP8P22894 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.32■□□□□ 0.52
MMP8P22894 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP8P22894 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP8P22894 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
MMP8P22894 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MMP8P22894 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MMP8P22894 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP8P22894 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP8P22894 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP8P22894 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP8P22894 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 AL121761.2-201ENST00000598007 1648 ntBASIC18.31■□□□□ 0.52
MMP8P22894 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
MMP8P22894 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP8P22894 AC132008.2-207ENST00000454517 770 ntBASIC18.31■□□□□ 0.52
MMP8P22894 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.31■□□□□ 0.52
MMP8P22894 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.31■□□□□ 0.52
MMP8P22894 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 AC060834.1-201ENST00000443027 2032 ntBASIC18.31■□□□□ 0.52
MMP8P22894 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 PCDHA12-202ENST00000613593 2588 ntBASIC18.31■□□□□ 0.52
MMP8P22894 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP8P22894 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP8P22894 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms