Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SDHBP21912 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SDHBP21912 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDHBP21912 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDHBP21912 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.05■□□□□ 0.32
SDHBP21912 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SDHBP21912 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SDHBP21912 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDHBP21912 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SDHBP21912 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SDHBP21912 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.04■□□□□ 0.32
SDHBP21912 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.04■□□□□ 0.32
SDHBP21912 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.04■□□□□ 0.32
SDHBP21912 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SDHBP21912 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.04■□□□□ 0.32
SDHBP21912 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.04■□□□□ 0.32
SDHBP21912 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SDHBP21912 RN7SL589P-201ENST00000481268 310 ntBASIC17.04■□□□□ 0.32
SDHBP21912 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.04■□□□□ 0.32
SDHBP21912 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 AL158211.3-201ENST00000607385 239 ntBASIC17.04■□□□□ 0.32
SDHBP21912 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 AC009118.2-201ENST00000613275 655 ntBASIC17.04■□□□□ 0.32
SDHBP21912 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SDHBP21912 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.04■□□□□ 0.32
SDHBP21912 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SDHBP21912 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SDHBP21912 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SDHBP21912 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SDHBP21912 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.03■□□□□ 0.32
SDHBP21912 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.03■□□□□ 0.32
SDHBP21912 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SDHBP21912 SPDYE7P-202ENST00000420373 878 ntBASIC17.03■□□□□ 0.32
SDHBP21912 KRT18P32-201ENST00000424695 1287 ntBASIC17.03■□□□□ 0.32
SDHBP21912 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SDHBP21912 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.03■□□□□ 0.32
SDHBP21912 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.03■□□□□ 0.32
SDHBP21912 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.03■□□□□ 0.32
SDHBP21912 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.03■□□□□ 0.32
SDHBP21912 IGHV3-71-201ENST00000523324 359 ntBASIC17.03■□□□□ 0.32
SDHBP21912 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SDHBP21912 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.03■□□□□ 0.32
SDHBP21912 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.03■□□□□ 0.32
SDHBP21912 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SDHBP21912 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.03■□□□□ 0.32
SDHBP21912 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.02■□□□□ 0.32
SDHBP21912 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.02■□□□□ 0.32
SDHBP21912 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.02■□□□□ 0.32
SDHBP21912 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.02■□□□□ 0.32
SDHBP21912 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.02■□□□□ 0.32
SDHBP21912 AL592309.1-201ENST00000443127 649 ntBASIC17.02■□□□□ 0.32
SDHBP21912 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.02■□□□□ 0.32
SDHBP21912 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.02■□□□□ 0.32
SDHBP21912 AL390754.1-201ENST00000619088 582 ntBASIC17.02■□□□□ 0.32
SDHBP21912 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.02■□□□□ 0.32
SDHBP21912 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SDHBP21912 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.02■□□□□ 0.31
SDHBP21912 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SDHBP21912 PCDHB18P-201ENST00000524813 2368 ntBASIC17.02■□□□□ 0.31
SDHBP21912 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.02■□□□□ 0.31
SDHBP21912 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SDHBP21912 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SDHBP21912 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SDHBP21912 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SDHBP21912 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SDHBP21912 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms