Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.14■□□□□ 0.65
ATF7P17544 UPF3AP3-201ENST00000420996 769 ntBASIC19.14■□□□□ 0.65
ATF7P17544 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.14■□□□□ 0.65
ATF7P17544 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.14■□□□□ 0.65
ATF7P17544 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.14■□□□□ 0.65
ATF7P17544 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.14■□□□□ 0.65
ATF7P17544 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.14■□□□□ 0.65
ATF7P17544 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.14■□□□□ 0.65
ATF7P17544 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.14■□□□□ 0.65
ATF7P17544 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ATF7P17544 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.14■□□□□ 0.65
ATF7P17544 AL355385.1-201ENST00000606123 409 ntBASIC19.14■□□□□ 0.65
ATF7P17544 AC019129.2-201ENST00000609837 1235 ntBASIC19.14■□□□□ 0.65
ATF7P17544 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ATF7P17544 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF7P17544 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF7P17544 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF7P17544 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATF7P17544 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.14■□□□□ 0.65
ATF7P17544 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.14■□□□□ 0.65
ATF7P17544 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF7P17544 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATF7P17544 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF7P17544 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF7P17544 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF7P17544 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF7P17544 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.13■□□□□ 0.65
ATF7P17544 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ATF7P17544 PMS2P2-201ENST00000425039 1128 ntBASIC19.13■□□□□ 0.65
ATF7P17544 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.13■□□□□ 0.65
ATF7P17544 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.13■□□□□ 0.65
ATF7P17544 AC009947.1-201ENST00000444350 727 ntBASIC19.13■□□□□ 0.65
ATF7P17544 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.13■□□□□ 0.65
ATF7P17544 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF7P17544 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.13■□□□□ 0.65
ATF7P17544 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.13■□□□□ 0.65
ATF7P17544 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.13■□□□□ 0.65
ATF7P17544 AC055717.3-201ENST00000622967 595 ntBASIC19.13■□□□□ 0.65
ATF7P17544 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 KRT18P55-202ENST00000578578 1546 ntBASIC19.13■□□□□ 0.65
ATF7P17544 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF7P17544 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.13■□□□□ 0.65
ATF7P17544 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.13■□□□□ 0.65
ATF7P17544 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF7P17544 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.13■□□□□ 0.65
ATF7P17544 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF7P17544 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF7P17544 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF7P17544 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 AC008764.6-201ENST00000595909 2069 ntBASIC19.12■□□□□ 0.65
ATF7P17544 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.12■□□□□ 0.65
ATF7P17544 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ATF7P17544 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.12■□□□□ 0.65
ATF7P17544 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 AL591424.1-201ENST00000442569 1213 ntBASIC19.12■□□□□ 0.65
ATF7P17544 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
ATF7P17544 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.12■□□□□ 0.65
ATF7P17544 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 AL139424.1-201ENST00000607572 797 ntBASIC19.12■□□□□ 0.65
ATF7P17544 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ATF7P17544 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATF7P17544 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ATF7P17544 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.12■□□□□ 0.65
ATF7P17544 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ATF7P17544 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF7P17544 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms