Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.48■□□□□ 0.39
TRBC1P01850 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRBC1P01850 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBC1P01850 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRBC1P01850 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBC1P01850 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBC1P01850 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBC1P01850 AC021087.4-201ENST00000563761 564 ntBASIC17.48■□□□□ 0.39
TRBC1P01850 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBC1P01850 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBC1P01850 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRBC1P01850 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBC1P01850 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBC1P01850 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TRBC1P01850 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBC1P01850 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBC1P01850 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBC1P01850 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBC1P01850 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBC1P01850 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.47■□□□□ 0.39
TRBC1P01850 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBC1P01850 MTDHP4-201ENST00000600287 670 ntBASIC17.47■□□□□ 0.39
TRBC1P01850 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBC1P01850 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRBC1P01850 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
TRBC1P01850 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBC1P01850 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBC1P01850 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TRBC1P01850 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRBC1P01850 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBC1P01850 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.46■□□□□ 0.39
TRBC1P01850 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 KRT18P67-201ENST00000432816 1264 ntBASIC17.46■□□□□ 0.39
TRBC1P01850 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.46■□□□□ 0.39
TRBC1P01850 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.46■□□□□ 0.39
TRBC1P01850 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBC1P01850 AC073648.2-201ENST00000510116 352 ntBASIC17.46■□□□□ 0.39
TRBC1P01850 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBC1P01850 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBC1P01850 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBC1P01850 AC025062.2-201ENST00000605477 670 ntBASIC17.46■□□□□ 0.39
TRBC1P01850 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRBC1P01850 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TRBC1P01850 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBC1P01850 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBC1P01850 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
TRBC1P01850 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRBC1P01850 AL135999.2-201ENST00000622438 1686 ntBASIC17.45■□□□□ 0.38
TRBC1P01850 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBC1P01850 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBC1P01850 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.45■□□□□ 0.38
TRBC1P01850 AC018712.1-201ENST00000455767 687 ntBASIC17.45■□□□□ 0.38
TRBC1P01850 RNPS1P1-201ENST00000507437 918 ntBASIC17.45■□□□□ 0.38
TRBC1P01850 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.45■□□□□ 0.38
TRBC1P01850 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.45■□□□□ 0.38
TRBC1P01850 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.45■□□□□ 0.38
TRBC1P01850 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRBC1P01850 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBC1P01850 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBC1P01850 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRBC1P01850 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBC1P01850 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms