Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFP01375 AL135999.2-201ENST00000622438 1686 ntBASIC17.01■□□□□ 0.31
TNFP01375 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TNFP01375 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17■□□□□ 0.31
TNFP01375 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17■□□□□ 0.31
TNFP01375 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17■□□□□ 0.31
TNFP01375 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17■□□□□ 0.31
TNFP01375 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17■□□□□ 0.31
TNFP01375 YBX2P1-201ENST00000394192 760 ntBASIC17■□□□□ 0.31
TNFP01375 AC023274.1-201ENST00000418278 595 ntBASIC17■□□□□ 0.31
TNFP01375 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17■□□□□ 0.31
TNFP01375 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17■□□□□ 0.31
TNFP01375 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TNFP01375 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17■□□□□ 0.31
TNFP01375 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17■□□□□ 0.31
TNFP01375 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17■□□□□ 0.31
TNFP01375 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17■□□□□ 0.31
TNFP01375 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TNFP01375 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17■□□□□ 0.31
TNFP01375 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17■□□□□ 0.31
TNFP01375 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17■□□□□ 0.31
TNFP01375 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFP01375 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17■□□□□ 0.31
TNFP01375 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 AL590787.1-201ENST00000568856 1315 ntBASIC16.99■□□□□ 0.31
TNFP01375 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFP01375 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TNFP01375 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFP01375 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TNFP01375 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 UPF3AP3-201ENST00000420996 769 ntBASIC16.99■□□□□ 0.31
TNFP01375 AC004832.2-201ENST00000426397 482 ntBASIC16.99■□□□□ 0.31
TNFP01375 KRT18P2-201ENST00000447938 1258 ntBASIC16.99■□□□□ 0.31
TNFP01375 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFP01375 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 MTDHP5-201ENST00000598980 586 ntBASIC16.99■□□□□ 0.31
TNFP01375 AC010654.1-201ENST00000615722 808 ntBASIC16.99■□□□□ 0.31
TNFP01375 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.99■□□□□ 0.31
TNFP01375 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TNFP01375 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFP01375 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFP01375 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TNFP01375 PI4KAP1-204ENST00000612579 1703 ntBASIC16.99■□□□□ 0.31
TNFP01375 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 AC006116.8-202ENST00000587620 1550 ntBASIC16.98■□□□□ 0.31
TNFP01375 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFP01375 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
TNFP01375 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.98■□□□□ 0.31
TNFP01375 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFP01375 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFP01375 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TNFP01375 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
TNFP01375 HCG4B-203ENST00000450128 991 ntBASIC16.98■□□□□ 0.31
TNFP01375 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFP01375 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.98■□□□□ 0.31
TNFP01375 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.98■□□□□ 0.31
TNFP01375 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms