Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
OPHN1O60890 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
OPHN1O60890 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.24■□□□□ 0.51
OPHN1O60890 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
OPHN1O60890 KRT18P13-201ENST00000400056 1290 ntBASIC18.24■□□□□ 0.51
OPHN1O60890 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.24■□□□□ 0.51
OPHN1O60890 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 SAPCD2P3-201ENST00000455031 850 ntBASIC18.24■□□□□ 0.51
OPHN1O60890 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.24■□□□□ 0.51
OPHN1O60890 VENTXP7-201ENST00000475503 772 ntBASIC18.24■□□□□ 0.51
OPHN1O60890 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.24■□□□□ 0.51
OPHN1O60890 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.24■□□□□ 0.51
OPHN1O60890 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.24■□□□□ 0.51
OPHN1O60890 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.24■□□□□ 0.51
OPHN1O60890 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
OPHN1O60890 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.24■□□□□ 0.51
OPHN1O60890 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.24■□□□□ 0.51
OPHN1O60890 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.24■□□□□ 0.51
OPHN1O60890 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
OPHN1O60890 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.23■□□□□ 0.51
OPHN1O60890 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 TNRC18P3-201ENST00000441896 2691 ntBASIC18.23■□□□□ 0.51
OPHN1O60890 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
OPHN1O60890 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
OPHN1O60890 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.23■□□□□ 0.51
OPHN1O60890 AL353692.3-201ENST00000407031 1396 ntBASIC18.23■□□□□ 0.51
OPHN1O60890 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.23■□□□□ 0.51
OPHN1O60890 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.23■□□□□ 0.51
OPHN1O60890 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.23■□□□□ 0.51
OPHN1O60890 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.23■□□□□ 0.51
OPHN1O60890 GPR32P1-201ENST00000601788 811 ntBASIC18.23■□□□□ 0.51
OPHN1O60890 AL671883.3-201ENST00000603274 991 ntBASIC18.23■□□□□ 0.51
OPHN1O60890 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.23■□□□□ 0.51
OPHN1O60890 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.23■□□□□ 0.51
OPHN1O60890 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.23■□□□□ 0.51
OPHN1O60890 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
OPHN1O60890 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
OPHN1O60890 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
OPHN1O60890 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.23■□□□□ 0.51
OPHN1O60890 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPHN1O60890 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
OPHN1O60890 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 LINC00304-203ENST00000565008 1864 ntBASIC18.22■□□□□ 0.51
OPHN1O60890 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.22■□□□□ 0.51
OPHN1O60890 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
OPHN1O60890 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
OPHN1O60890 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.22■□□□□ 0.51
OPHN1O60890 AC112698.1-201ENST00000510299 916 ntBASIC18.22■□□□□ 0.51
OPHN1O60890 GUSBP12-201ENST00000513727 720 ntBASIC18.22■□□□□ 0.51
OPHN1O60890 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.22■□□□□ 0.51
OPHN1O60890 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.22■□□□□ 0.51
OPHN1O60890 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.22■□□□□ 0.51
OPHN1O60890 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.22■□□□□ 0.51
OPHN1O60890 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
OPHN1O60890 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.22■□□□□ 0.51
OPHN1O60890 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.22■□□□□ 0.51
OPHN1O60890 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.22■□□□□ 0.51
OPHN1O60890 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
OPHN1O60890 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPHN1O60890 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.22■□□□□ 0.51
OPHN1O60890 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms