Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.68■□□□□ 0.26
LCMT2O60294 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.68■□□□□ 0.26
LCMT2O60294 BX005266.1-201ENST00000473402 457 ntBASIC16.68■□□□□ 0.26
LCMT2O60294 SART3-203ENST00000546611 1184 ntBASIC16.68■□□□□ 0.26
LCMT2O60294 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
LCMT2O60294 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.68■□□□□ 0.26
LCMT2O60294 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.68■□□□□ 0.26
LCMT2O60294 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LCMT2O60294 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.68■□□□□ 0.26
LCMT2O60294 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
LCMT2O60294 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.68■□□□□ 0.26
LCMT2O60294 AC108860.2-201ENST00000562760 2183 ntBASIC16.68■□□□□ 0.26
LCMT2O60294 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LCMT2O60294 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LCMT2O60294 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.68■□□□□ 0.26
LCMT2O60294 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCMT2O60294 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LCMT2O60294 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.67■□□□□ 0.26
LCMT2O60294 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.67■□□□□ 0.26
LCMT2O60294 AL356309.3-201ENST00000624132 1934 ntBASIC16.67■□□□□ 0.26
LCMT2O60294 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LCMT2O60294 AL135999.2-201ENST00000622438 1686 ntBASIC16.67■□□□□ 0.26
LCMT2O60294 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.67■□□□□ 0.26
LCMT2O60294 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.67■□□□□ 0.26
LCMT2O60294 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.67■□□□□ 0.26
LCMT2O60294 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LCMT2O60294 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LCMT2O60294 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.67■□□□□ 0.26
LCMT2O60294 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCMT2O60294 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LCMT2O60294 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LCMT2O60294 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.66■□□□□ 0.26
LCMT2O60294 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LCMT2O60294 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.66■□□□□ 0.26
LCMT2O60294 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
LCMT2O60294 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.66■□□□□ 0.26
LCMT2O60294 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.66■□□□□ 0.26
LCMT2O60294 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.66■□□□□ 0.26
LCMT2O60294 AC079781.3-201ENST00000449110 356 ntBASIC16.66■□□□□ 0.26
LCMT2O60294 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LCMT2O60294 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.66■□□□□ 0.26
LCMT2O60294 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.66■□□□□ 0.26
LCMT2O60294 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LCMT2O60294 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
LCMT2O60294 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.66■□□□□ 0.26
LCMT2O60294 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LCMT2O60294 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LCMT2O60294 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LCMT2O60294 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LCMT2O60294 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCMT2O60294 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.66■□□□□ 0.26
LCMT2O60294 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms