Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC28A2O43868 YBX2P1-201ENST00000394192 760 ntBASIC16.85■□□□□ 0.29
SLC28A2O43868 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC28A2O43868 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 AL591424.1-201ENST00000442569 1213 ntBASIC16.85■□□□□ 0.29
SLC28A2O43868 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
SLC28A2O43868 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC28A2O43868 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC28A2O43868 AC092364.2-202ENST00000597012 1073 ntBASIC16.85■□□□□ 0.29
SLC28A2O43868 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC28A2O43868 AL355877.3-201ENST00000622820 899 ntBASIC16.85■□□□□ 0.29
SLC28A2O43868 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC28A2O43868 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC28A2O43868 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SLC28A2O43868 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SLC28A2O43868 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC28A2O43868 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC28A2O43868 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC28A2O43868 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC28A2O43868 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.84■□□□□ 0.29
SLC28A2O43868 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC28A2O43868 SART3-203ENST00000546611 1184 ntBASIC16.84■□□□□ 0.29
SLC28A2O43868 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC28A2O43868 AP005901.3-202ENST00000581653 237 ntBASIC16.84■□□□□ 0.29
SLC28A2O43868 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC28A2O43868 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC28A2O43868 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC28A2O43868 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC28A2O43868 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC28A2O43868 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC28A2O43868 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SLC28A2O43868 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC28A2O43868 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC28A2O43868 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC28A2O43868 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SLC28A2O43868 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 DNAJB3-202ENST00000449667 1266 ntBASIC16.83■□□□□ 0.28
SLC28A2O43868 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SLC28A2O43868 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC28A2O43868 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC28A2O43868 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC28A2O43868 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 AC008687.5-201ENST00000593746 558 ntBASIC16.83■□□□□ 0.28
SLC28A2O43868 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC28A2O43868 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SLC28A2O43868 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC28A2O43868 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC28A2O43868 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC28A2O43868 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC28A2O43868 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC28A2O43868 AC132938.6-201ENST00000623828 1655 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms