Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AL591684.3-201ENST00000605187 298 ntBASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AL031008.1-201ENST00000619963 541 ntBASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC132938.6-201ENST00000623828 1655 ntBASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LINC00602-201ENST00000629776 2065 ntBASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AL160237.2-201ENST00000556165 472 ntBASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC009154.2-201ENST00000621177 724 ntBASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC100803.2-201ENST00000562459 1963 ntBASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC079781.3-201ENST00000449110 356 ntBASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FDX1P1-201ENST00000449115 551 ntBASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC068472.1-201ENST00000474589 881 ntBASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms