Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD248Q9HCU0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CD248Q9HCU0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CD248Q9HCU0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.39■□□□□ 0.54
CD248Q9HCU0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CD248Q9HCU0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 PP12613-201ENST00000424958 2230 ntBASIC18.39■□□□□ 0.53
CD248Q9HCU0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 AL024508.2-201ENST00000607749 1894 ntBASIC18.39■□□□□ 0.53
CD248Q9HCU0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD248Q9HCU0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 AC009102.3-201ENST00000623118 1491 ntBASIC18.39■□□□□ 0.53
CD248Q9HCU0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CD248Q9HCU0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 FLJ38576-201ENST00000623820 2459 ntBASIC18.38■□□□□ 0.53
CD248Q9HCU0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 AC005336.2-201ENST00000593183 939 ntBASIC18.38■□□□□ 0.53
CD248Q9HCU0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms