Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 AL355306.1-201ENST00000415580 579 ntBASIC18.98■□□□□ 0.63
HIPK3Q9H422 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 AC005237.2-201ENST00000434368 219 ntBASIC18.98■□□□□ 0.63
HIPK3Q9H422 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.98■□□□□ 0.63
HIPK3Q9H422 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIPK3Q9H422 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 AL671277.1-201ENST00000429656 993 ntBASIC18.97■□□□□ 0.63
HIPK3Q9H422 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 INGX-202ENST00000489074 768 ntBASIC18.97■□□□□ 0.63
HIPK3Q9H422 FAM86C2P-203ENST00000528684 1004 ntBASIC18.97■□□□□ 0.63
HIPK3Q9H422 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HIPK3Q9H422 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIPK3Q9H422 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.97■□□□□ 0.63
HIPK3Q9H422 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 CNN2P2-201ENST00000443536 909 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 CNN2P3-201ENST00000450201 906 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 SPDYE11-202ENST00000450699 704 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 KRT8P48-201ENST00000515599 1220 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 SPDYE9P-201ENST00000570642 692 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 SPDYE10P-202ENST00000612005 668 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 SPDYE8P-202ENST00000612377 668 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 AL136317.3-201ENST00000618497 906 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms