Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 LYSMD4-203ENST00000378904 2122 ntBASIC16.1■□□□□ 0.17
TRIM2Q9C040 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 RN7SL606P-201ENST00000472779 293 ntBASIC16.1■□□□□ 0.17
TRIM2Q9C040 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 AL139327.4-201ENST00000612362 153 ntBASIC16.1■□□□□ 0.17
TRIM2Q9C040 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM2Q9C040 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM2Q9C040 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 AC010460.3-201ENST00000511359 1579 ntBASIC16.09■□□□□ 0.17
TRIM2Q9C040 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 MYCLP1-201ENST00000372451 1075 ntBASIC16.09■□□□□ 0.17
TRIM2Q9C040 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 AL353801.3-201ENST00000609898 542 ntBASIC16.09■□□□□ 0.17
TRIM2Q9C040 AL592071.1-201ENST00000611956 408 ntBASIC16.09■□□□□ 0.17
TRIM2Q9C040 IGHV3-41-201ENST00000613121 348 ntBASIC16.09■□□□□ 0.17
TRIM2Q9C040 AC124864.1-201ENST00000623408 392 ntBASIC16.09■□□□□ 0.17
TRIM2Q9C040 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM2Q9C040 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM2Q9C040 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.08■□□□□ 0.17
TRIM2Q9C040 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM2Q9C040 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM2Q9C040 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.08■□□□□ 0.17
TRIM2Q9C040 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM2Q9C040 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRIM2Q9C040 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM2Q9C040 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM2Q9C040 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM2Q9C040 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM2Q9C040 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM2Q9C040 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms