Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 RBPMS2P1-201ENST00000437762 623 ntBASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 MIR4538-201ENST00000581377 78 ntBASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 MIR6727-201ENST00000620702 65 ntBASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 AC129492.6-201ENST00000611383 1305 ntBASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 KRT8P44-201ENST00000441609 1350 ntBASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 KRT8P50-201ENST00000562022 1438 ntBASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP3Q9BZ76 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 AC093503.3-201ENST00000624917 2352 ntBASIC16.58■□□□□ 0.25
CNTNAP3Q9BZ76 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 AC022210.1-201ENST00000449856 793 ntBASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 AC004890.2-204ENST00000481968 304 ntBASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 KRT17P8-201ENST00000540749 863 ntBASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 RAB43P1-201ENST00000561790 589 ntBASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP3Q9BZ76 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 GPS2P2-201ENST00000430745 888 ntBASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 TP53TG3HP-202ENST00000569755 579 ntBASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 NEFHP1-201ENST00000412845 2629 ntBASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms