Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
SMOQ99835 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SMOQ99835 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 AL138688.1-201ENST00000624851 1594 ntBASIC18.27■□□□□ 0.52
SMOQ99835 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SMOQ99835 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.27■□□□□ 0.52
SMOQ99835 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.27■□□□□ 0.52
SMOQ99835 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SMOQ99835 RPL13AP23-201ENST00000480739 586 ntBASIC18.27■□□□□ 0.52
SMOQ99835 AC136632.2-201ENST00000512891 861 ntBASIC18.27■□□□□ 0.52
SMOQ99835 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.27■□□□□ 0.52
SMOQ99835 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.27■□□□□ 0.52
SMOQ99835 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.27■□□□□ 0.52
SMOQ99835 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SMOQ99835 AF228730.7-201ENST00000641842 219 ntBASIC18.27■□□□□ 0.52
SMOQ99835 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.27■□□□□ 0.52
SMOQ99835 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMOQ99835 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SMOQ99835 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SMOQ99835 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SMOQ99835 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.27■□□□□ 0.51
SMOQ99835 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.27■□□□□ 0.51
SMOQ99835 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.26■□□□□ 0.51
SMOQ99835 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SMOQ99835 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.26■□□□□ 0.51
SMOQ99835 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 RNA5SP415-201ENST00000517246 115 ntBASIC18.26■□□□□ 0.51
SMOQ99835 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.26■□□□□ 0.51
SMOQ99835 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.26■□□□□ 0.51
SMOQ99835 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.26■□□□□ 0.51
SMOQ99835 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.26■□□□□ 0.51
SMOQ99835 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.26■□□□□ 0.51
SMOQ99835 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.26■□□□□ 0.51
SMOQ99835 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SMOQ99835 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMOQ99835 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SMOQ99835 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.25■□□□□ 0.51
SMOQ99835 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SMOQ99835 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SMOQ99835 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SMOQ99835 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.25■□□□□ 0.51
SMOQ99835 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.25■□□□□ 0.51
SMOQ99835 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.25■□□□□ 0.51
SMOQ99835 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.25■□□□□ 0.51
SMOQ99835 UNC93B6-202ENST00000528242 690 ntBASIC18.25■□□□□ 0.51
SMOQ99835 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.25■□□□□ 0.51
SMOQ99835 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.25■□□□□ 0.51
SMOQ99835 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.25■□□□□ 0.51
SMOQ99835 MIR1199-201ENST00000621445 119 ntBASIC18.25■□□□□ 0.51
SMOQ99835 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SMOQ99835 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 GPR89P-201ENST00000407924 1495 ntBASIC18.25■□□□□ 0.51
SMOQ99835 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.25■□□□□ 0.51
SMOQ99835 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
SMOQ99835 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SMOQ99835 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMOQ99835 AL590787.1-201ENST00000568856 1315 ntBASIC18.24■□□□□ 0.51
SMOQ99835 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.24■□□□□ 0.51
SMOQ99835 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms