Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 SPDYE21P-201ENST00000413323 827 ntBASIC15.49■□□□□ 0.07
APH1AQ96BI3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 AF186996.4-201ENST00000467186 377 ntBASIC15.49■□□□□ 0.07
APH1AQ96BI3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 AC073648.2-201ENST00000510116 352 ntBASIC15.49■□□□□ 0.07
APH1AQ96BI3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 AC064862.7-201ENST00000604520 867 ntBASIC15.49■□□□□ 0.07
APH1AQ96BI3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 FAM197Y8-203ENST00000450145 560 ntBASIC15.48■□□□□ 0.07
APH1AQ96BI3 SIGLEC30P-201ENST00000455569 941 ntBASIC15.48■□□□□ 0.07
APH1AQ96BI3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 AC073592.4-201ENST00000623827 446 ntBASIC15.48■□□□□ 0.07
APH1AQ96BI3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 SIGLEC16-201ENST00000599858 1437 ntBASIC15.48■□□□□ 0.07
APH1AQ96BI3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APH1AQ96BI3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.48■□□□□ 0.07
APH1AQ96BI3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APH1AQ96BI3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 BX005266.1-201ENST00000473402 457 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 AP002469.2-201ENST00000531724 424 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 SART3-203ENST00000546611 1184 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 NKAPP1-205ENST00000585790 367 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 AC009336.1-201ENST00000608941 1553 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 AL139327.4-201ENST00000612362 153 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 TP73-AS1-207ENST00000624167 988 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.47■□□□□ 0.07
APH1AQ96BI3 AL022326.1-202ENST00000641533 845 ntBASIC15.47■□□□□ 0.07
APH1AQ96BI3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms