Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF4Q92544 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.52■□□□□ 0.23
TM9SF4Q92544 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF4Q92544 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF4Q92544 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TM9SF4Q92544 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.52■□□□□ 0.23
TM9SF4Q92544 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TM9SF4Q92544 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 ABCD1P5-201ENST00000445663 754 ntBASIC16.51■□□□□ 0.23
TM9SF4Q92544 RPL13AP23-201ENST00000480739 586 ntBASIC16.51■□□□□ 0.23
TM9SF4Q92544 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 SLC25A1P1-201ENST00000528351 927 ntBASIC16.51■□□□□ 0.23
TM9SF4Q92544 AP001269.4-201ENST00000609611 512 ntBASIC16.51■□□□□ 0.23
TM9SF4Q92544 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 PP12613-201ENST00000424958 2230 ntBASIC16.51■□□□□ 0.23
TM9SF4Q92544 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM9SF4Q92544 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TM9SF4Q92544 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 AC092865.5-201ENST00000545435 363 ntBASIC16.5■□□□□ 0.23
TM9SF4Q92544 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 AP005117.1-201ENST00000584346 1413 ntBASIC16.5■□□□□ 0.23
TM9SF4Q92544 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.5■□□□□ 0.23
TM9SF4Q92544 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM9SF4Q92544 AC243591.1-201ENST00000452967 1364 ntBASIC16.5■□□□□ 0.23
TM9SF4Q92544 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms